Dcu_g38638


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g38638

Target Alias Description ECC score Gene Family Method Actions
AT1G18485 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G31920 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G47580 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.07 OrthoFinder output from all 47 species
AT5G66520 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g004506 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g30904 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g40084 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g16640 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g16691 No alias ssDNA-binding protein *(OSB) & original description: none 0.11 OrthoFinder output from all 47 species
Aop_g18162 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g35556 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene48128.t1 Aspi01Gene48128 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0090.g042650 No alias not classified & original description: CDS=1-1848 0.06 OrthoFinder output from all 47 species
Dac_g42748 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g13517 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26473 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g36893 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38628 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dcu_g38651 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g39805 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g39981 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Dcu_g46395 EMB2758 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g13218 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g23238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g01524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g31355 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g07924 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g23775 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001817 No alias not classified & original description: CDS=1-3483 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005914 No alias not classified & original description: CDS=1-2298 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019330 No alias not classified & original description: CDS=1-2295 0.05 OrthoFinder output from all 47 species
Sam_g07204 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g17989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04723 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55537 DOT4 not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 171 185
IPR002885 Pentatricopeptide_repeat 143 167
IPR002885 Pentatricopeptide_repeat 41 63
IPR002885 Pentatricopeptide_repeat 67 113
No external refs found!