Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G03510 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT2G02980 | OTP85 | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g003262 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g034945 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g035612 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g036796 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g049577 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g066134 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g10633 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g41951 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g38631 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g06307 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06689 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g09957 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g13814 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g48164 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g54924 | OTP86 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g06025 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g18705 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g27896 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g70449 | DOT4 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene03942.t1 | Aspi01Gene03942 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene24003.t1 | OTP84, Aspi01Gene24003 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene31801.t1 | Aspi01Gene31801 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene32959.t1 | Aspi01Gene32959 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene38168.t1 | Aspi01Gene38168 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene50524.t1 | Aspi01Gene50524 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene69211.t1 | Aspi01Gene69211 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29381 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g29878 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g35191 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g45697 | EMB2261 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g67785 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.14G063100.1 | Ceric.14G063100 | not classified & original description: pacid=50634149... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.21G053500.1 | Ceric.21G053500 | not classified & original description: pacid=50604142... | 0.05 | OrthoFinder output from all 47 species | |
| Cre12.g483720 | No alias | Cell cycle.organelle machineries.DNA... | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g41011 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g20812 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01021756001 | No alias | Pentatricopeptide repeat-containing protein At4g21300... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g43420.1 | OSB1, LOC_Os03g43420 | ssDNA-binding protein (OSB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g33700.1 | LOC_Os08g33700 | Pentatricopeptide repeat-containing protein At3g47530... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g24640.1 | REME1, LOC_Os09g24640 | Pentatricopeptide repeat-containing protein At2g36730... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g03339 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g12108 | OTP86 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g17789 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g02262 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04822 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g10880 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g36302 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g36336 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_452577g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g01790.1 | No alias | ssDNA-binding protein (OSB) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g47208 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g20192 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g01500 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g01886 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g10372 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g14311 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g34957 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63661 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g13330 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0006.g003098 | No alias | not classified & original description: CDS=1-2883 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g07175 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g21254 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g27561 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g34587 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g34646 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g096610.2.1 | Solyc03g096610 | Pentatricopeptide repeat-containing protein At1g33350... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g009500.1.1 | Solyc06g009500 | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g062820.1.1 | Solyc07g062820 | RNA editing factor (SEL1/PDM1) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g50449 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g06092 | OTP86 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g35678 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g44315 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e002552_P001 | Zm00001e002552 | RNA editing factor (SEL1/PDM1) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e029819_P003 | CRR22, Zm00001e029819 | RNA editing factor (CRR22) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 396 | 426 |
| IPR002885 | Pentatricopeptide_repeat | 569 | 594 |
| IPR002885 | Pentatricopeptide_repeat | 368 | 395 |
| IPR046848 | E_motif | 612 | 674 |
| IPR002885 | Pentatricopeptide_repeat | 293 | 341 |
| IPR002885 | Pentatricopeptide_repeat | 495 | 541 |
| IPR002885 | Pentatricopeptide_repeat | 191 | 239 |
| No external refs found! |
