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  5. Dcu_g38945

Dcu_g38945 (ATHDA14, hda14)


Aliases : ATHDA14, hda14

Description : class-II histone deacetylase & original description: none


Gene families : OG0006068 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g38945
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00054p00095350 ATHDA14, hda14,... Chromatin organisation.histone modifications.histone... 0.06 OrthoFinder output from all 47 species
AT4G33470 ATHDA14, hda14 histone deacetylase 14 0.05 OrthoFinder output from all 47 species
Aev_g03857 ATHDA14, hda14 class-II histone deacetylase & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g17399 ATHDA14, hda14 class-II histone deacetylase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene67945.t1 ATHDA14, hda14,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g00560 ATHDA14, hda14 class-II histone deacetylase & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os12g08220.1 ATHDA14, hda14,... class-II histone deacetylase 0.06 OrthoFinder output from all 47 species
Lfl_g05964 ATHDA14, hda14 class-II histone deacetylase & original description: none 0.06 OrthoFinder output from all 47 species
MA_10435687g0010 ATHDA14, hda14 class-II histone deacetylase 0.04 OrthoFinder output from all 47 species
Pir_g19601 ATHDA14, hda14 class-II histone deacetylase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06418 ATHDA14, hda14 class-II histone deacetylase & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g10669 ATHDA14, hda14 class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
Smo179763 ATHDA14, hda14 Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
Smo448239 ATHDA14, hda14 Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
Solyc01g009120.3.1 ATHDA14, hda14,... class-II histone deacetylase 0.05 OrthoFinder output from all 47 species
Spa_g09807 ATHDA14, hda14 class-II histone deacetylase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11637 ATHDA14, hda14 class-II histone deacetylase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 125 428
No external refs found!