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  5. Dcu_g39546

Dcu_g39546 (LTPG1)


Aliases : LTPG1

Description : arabinogalactan protein *(Xylogen) & original description: none


Gene families : OG0000195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g39546

Target Alias Description ECC score Gene Family Method Actions
AT2G13820 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
AT4G12360 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
Aop_g06034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008272001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
Gb_11754 No alias xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
LOC_Os06g49770.1 LOC_Os06g49770 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g07790.1 LOC_Os07g07790 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os07g09970.1 LOC_Os07g09970 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os10g11370.1 LOC_Os10g11370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g12260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_99762g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g09535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g44457 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c14_3790V3.1 Pp3c14_3790 Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
Ppi_g61681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014611 No alias arabinogalactan protein *(Xylogen) & original... 0.03 OrthoFinder output from all 47 species
Solyc06g069110.4.1 Solyc06g069110 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Solyc06g073660.3.1 Solyc06g073660 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 63 148
No external refs found!