Dcu_g40867


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g40867

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00138570 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.01 OrthoFinder output from all 47 species
AMTR_s00010p00113430 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g18485... 0.01 OrthoFinder output from all 47 species
AMTR_s00010p00260120 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g74600,... 0.01 OrthoFinder output from all 47 species
AMTR_s00025p00155620 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
AMTR_s00065p00031420 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g33680... 0.02 OrthoFinder output from all 47 species
AMTR_s00066p00062930 EMB2261,... Pentatricopeptide repeat-containing protein At3g49170,... 0.02 OrthoFinder output from all 47 species
AMTR_s00095p00039180 OTP86,... Pentatricopeptide repeat-containing protein At3g63370,... 0.01 OrthoFinder output from all 47 species
AMTR_s00122p00121750 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
Adi_g072273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g074694 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16530 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g16618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24083 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06392 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16090 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19051 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29210 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30540 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30849 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g30904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g58397 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene00209.t1 EMB2758, Aspi01Gene00209 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene00588.t1 Aspi01Gene00588 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01654.t1 PTAC9, OSB2,... ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene02301.t1 Aspi01Gene02301 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene03412.t1 Aspi01Gene03412 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13883.t1 Aspi01Gene13883 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18019.t1 Aspi01Gene18019 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28051.t1 Aspi01Gene28051 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene29787.t2 Aspi01Gene29787 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene35154.t1 Aspi01Gene35154 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene36332.t2 Aspi01Gene36332 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene36735.t1 Aspi01Gene36735 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007645 OTP86 not classified & original description: CDS=47-2665 0.07 OrthoFinder output from all 47 species
Azfi_s0006.g010319 No alias not classified & original description: CDS=1-1401 0.05 OrthoFinder output from all 47 species
Azfi_s0008.g011478 No alias not classified & original description: CDS=1-2919 0.01 OrthoFinder output from all 47 species
Azfi_s0093.g043166 No alias not classified & original description: CDS=1-1980 0.02 OrthoFinder output from all 47 species
Azfi_s0444.g070598 EMB2758 not classified & original description: CDS=1-1605 0.06 OrthoFinder output from all 47 species
Azfi_s0768.g086029 No alias not classified & original description: CDS=1-2331 0.03 OrthoFinder output from all 47 species
Azfi_s1835.g107332 CRR22 not classified & original description: CDS=1-2094 0.04 OrthoFinder output from all 47 species
Cba_g07528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35114 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G127400.1 VAC1, ECB2,... not classified & original description: pacid=50592739... 0.04 OrthoFinder output from all 47 species
Ceric.04G106200.1 Ceric.04G106200 not classified & original description: pacid=50630879... 0.02 OrthoFinder output from all 47 species
Ceric.11G067400.1 Ceric.11G067400 not classified & original description: pacid=50595438... 0.09 OrthoFinder output from all 47 species
Ceric.19G075900.1 Ceric.19G075900 not classified & original description: pacid=50576584... 0.02 OrthoFinder output from all 47 species
Ceric.32G057100.1 Ceric.32G057100 not classified & original description: pacid=50598475... 0.01 OrthoFinder output from all 47 species
Ceric.32G076900.1 Ceric.32G076900 not classified & original description: pacid=50598031... 0.02 OrthoFinder output from all 47 species
Ceric.35G035600.1 Ceric.35G035600 not classified & original description: pacid=50580802... 0.01 OrthoFinder output from all 47 species
Dac_g16073 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g30285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g06754 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g07098 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g08437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28407 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g13325 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g17701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19510 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23295 REME1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01015461001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Len_g05253 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g12162 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33499 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g39568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22764 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g37283 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g37517 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g10059 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g07147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15427 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g24068 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02390 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03052 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g04075 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33192 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04362 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29380 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53679 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000561 No alias not classified & original description: CDS=191-3046 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011528 EMB2758 non-specific cation channel *(PQL1) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013199 No alias not classified & original description: CDS=1-744 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0151.g023411 REME1 not classified & original description: CDS=1-1494 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0223.g026268 No alias not classified & original description: CDS=1-2328 0.01 OrthoFinder output from all 47 species
Sam_g03385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16013 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g16066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo138948 No alias Pentatricopeptide repeat-containing protein At3g26782,... 0.02 OrthoFinder output from all 47 species
Tin_g05656 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g27584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 158 182
IPR002885 Pentatricopeptide_repeat 186 216
IPR002885 Pentatricopeptide_repeat 82 130
No external refs found!