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  5. Dcu_g41879

Dcu_g41879 (ABCB19, ATABCB19,...)


Aliases : ABCB19, ATABCB19, MDR1, MDR11, ATPGP19, ATMDR1, ATMDR11, PGP19

Description : subfamily ABCB transporter & original description: none


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g41879
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00254310 ABCB19,... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
AMTR_s00045p00109790 PGP11,... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00045p00109940 PGP11,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00049p00128390 PGP16,... ABC transporter B family member 16 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00055p00102180 ABCB14,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
AMTR_s00076p00195870 PGP1, ABCB1,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
AT1G27940 PGP13 P-glycoprotein 13 0.03 OrthoFinder output from all 47 species
AT1G28010 ABCB14, ATABCB14, PGP14 P-glycoprotein 14 0.02 OrthoFinder output from all 47 species
AT3G28415 No alias ABC transporter family protein 0.04 OrthoFinder output from all 47 species
AT4G01830 PGP5 P-glycoprotein 5 0.02 OrthoFinder output from all 47 species
AT4G25960 PGP2 P-glycoprotein 2 0.07 OrthoFinder output from all 47 species
AT5G46540 PGP7 P-glycoprotein 7 0.02 OrthoFinder output from all 47 species
Adi_g002454 PGP13 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g010407 PGP2 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g010452 ABCB19,... subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g058585 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060981 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103595 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113233 PGP2 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g16830 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07132 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25151 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05763 ABCB19,... subfamily ABCB transporter & original description: none 0.07 OrthoFinder output from all 47 species
Als_g07510 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09585 PGP10 subfamily ABCB transporter & original description: none 0.06 OrthoFinder output from all 47 species
Als_g12027 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14091 ATPGP4, PGP4, ABCB4, MDR4 subfamily ABCB transporter & original description: none 0.06 OrthoFinder output from all 47 species
Als_g14092 PGP21 subfamily ABCB transporter & original description: none 0.09 OrthoFinder output from all 47 species
Als_g18810 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28385 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g24610 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37349 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11005 PGP11 subfamily ABCB transporter & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g14003 PGP2 subfamily ABCB transporter & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g22138 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22258 PGP2 subfamily ABCB transporter & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g32929 ABCB19,... subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68609 PGP13 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42787.t1 ATPGP4, PGP4,... subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene45615.t1 PGP11, Aspi01Gene45615 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene62054.t1 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0002.g001271 ABCB19,... subfamily ABCB transporter & original description: CDS=82-3879 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010080 PGP2 subfamily ABCB transporter & original description: CDS=691-4485 0.06 OrthoFinder output from all 47 species
Azfi_s0232.g059284 PGP13 subfamily ABCB transporter & original description: CDS=307-4314 0.04 OrthoFinder output from all 47 species
Cba_g07645 PGP13 subfamily ABCB transporter & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g59935 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G076400.1 ABCB19,... subfamily ABCB transporter & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.34G053700.1 PGP2, Ceric.34G053700 subfamily ABCB transporter & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.35G032800.1 ABCB19,... subfamily ABCB transporter & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.36G025500.1 PGP2, Ceric.36G025500 subfamily ABCB transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.38G058800.1 PGP2, Ceric.38G058800 subfamily ABCB transporter & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g06724 PGP2 subfamily ABCB transporter & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g06939 PGP13 subfamily ABCB transporter & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g14063 PGP11 subfamily ABCB transporter & original description: none 0.09 OrthoFinder output from all 47 species
Dac_g35627 PGP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40237 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03201 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05841 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22982 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33169 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08514 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28161 PGP11 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g30302 PGP2 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g30303 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46023 PGP13 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g27838 PGP11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000580001 No alias ABC transporter B family member 15 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01006613001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01013125001 PGP2 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01015306001 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Gb_07563 ABCB19,... subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
Gb_10211 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_13906 PGP2 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_32125 PGP11 subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
Gb_33057 ABCB19,... subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
Gb_33058 ABCB19,... subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
Gb_36497 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
LOC_Os02g46680.1 PGP2, LOC_Os02g46680 subfamily ABCB transporter 0.07 OrthoFinder output from all 47 species
LOC_Os04g38570.1 ABCB19,... auxin efflux transporter (ABCB19) 0.03 OrthoFinder output from all 47 species
Len_g02924 PGP2 subfamily ABCB transporter & original description: none 0.07 OrthoFinder output from all 47 species
Len_g14182 PGP13 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Len_g23455 PGP11 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g08040 ABCB19,... subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g40621 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_10432922g0010 No alias subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
MA_126766g0010 PGP2 subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
MA_3448627g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_82945g0030 PGP17 ABC transporter B family member 17 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_934204g0010 No alias subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Mp2g02910.1 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Mp2g02920.1 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Mp2g06270.1 PGP20 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Mp2g11920.1 ABCB19,... subfamily ABCB transporter 0.09 OrthoFinder output from all 47 species
Mp7g04390.1 ATPGP4, PGP4, ABCB4, MDR4 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Mpzg01120.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g13353 PGP13 subfamily ABCB transporter & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g14678 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31505 PGP11 subfamily ABCB transporter & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g02480 PGP11 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03862 ABCB19,... subfamily ABCB transporter & original description: none 0.1 OrthoFinder output from all 47 species
Nbi_g04453 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19754 ABCB19,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g24809 PGP2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g27262 PGP13 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28031 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32847 PGP21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g37290 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29224 ABCB19,... subfamily ABCB transporter & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g29842 PGP10 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g38310 PGP13 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43029 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04029 PGP11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14316 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g50526 PGP11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25857 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03284 PGP13 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07008 ABCB14, ATABCB14, PGP14 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17867 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60298 PGP2 subfamily ABCB transporter & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000035 PGP13 subfamily ABCB transporter & original description: CDS=555-4511 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014291 PGP2 subfamily ABCB transporter & original description: CDS=1-4248 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023107 PGP2 subfamily ABCB transporter & original description: CDS=729-4781 0.05 OrthoFinder output from all 47 species
Smo148837 ABCB19,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo169182 ATPGP4, PGP4, ABCB4, MDR4 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Smo230688 ABCB19,... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
Smo408755 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo74892 PGP11 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Smo99885 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Solyc03g005860.4.1 PGP11, Solyc03g005860 subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
Solyc06g009280.1.1 PGP11, Solyc06g009280 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Solyc11g067300.2.1 PGP11, Solyc11g067300 subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
Spa_g06203 PGP13 subfamily ABCB transporter & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g08601 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09413 PGP2 subfamily ABCB transporter & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g47519 PGP2 subfamily ABCB transporter & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g56665 ABCB19,... not classified & original description: none 0.12 OrthoFinder output from all 47 species
Tin_g06699 PGP2 subfamily ABCB transporter & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g31718 PGP2 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e023274_P001 PGP2, Zm00001e023274 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Zm00001e040247_P001 ABCB14,... subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Zm00001e041008_P003 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Zm00001e041760_P001 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 1077 1225
IPR003439 ABC_transporter-like_ATP-bd 443 591
IPR011527 ABC1_TM_dom 737 1009
IPR011527 ABC1_TM_dom 54 321
No external refs found!