Dcu_g43235 (OTP84)


Aliases : OTP84

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g43235

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00175270 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g31790... 0.04 OrthoFinder output from all 47 species
AMTR_s00010p00259620 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g35030,... 0.04 OrthoFinder output from all 47 species
Als_g04417 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g18934 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g58106 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g30099 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g04342 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g21473 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g27066 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g28410 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g32918 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g36381 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g38453 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g69999 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s3922.g117339 No alias not classified & original description: CDS=1-831 0.12 OrthoFinder output from all 47 species
Cba_g07175 CRR22 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Cba_g29798 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g75327 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G029900.1 Ceric.10G029900 not classified & original description: pacid=50612941... 0.05 OrthoFinder output from all 47 species
Ceric.34G043400.1 Ceric.34G043400 not classified & original description: pacid=50623137... 0.05 OrthoFinder output from all 47 species
Ceric.36G058800.1 Ceric.36G058800 not classified & original description: pacid=50569192... 0.05 OrthoFinder output from all 47 species
Cre12.g483700 OSB4 Cell cycle.organelle machineries.DNA... 0.05 OrthoFinder output from all 47 species
Dac_g39652 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42748 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g21447 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g02898 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g09042 OTP80 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g19289 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g25656 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g33302 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g04495 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g13478 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g41882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03893 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02331 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g03245 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06149 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g07547 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g09254 CRR22 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g17508 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g53025 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g53554 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g53968 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g06265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo126075 No alias Pentatricopeptide repeat-containing protein At4g30700... 0.05 OrthoFinder output from all 47 species
Smo45004 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Spa_g52240 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g34472 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 241 290
IPR002885 Pentatricopeptide_repeat 140 188
IPR002885 Pentatricopeptide_repeat 40 88
IPR002885 Pentatricopeptide_repeat 444 491
IPR002885 Pentatricopeptide_repeat 343 389
IPR046848 E_motif 561 623
IPR002885 Pentatricopeptide_repeat 519 543
IPR002885 Pentatricopeptide_repeat 317 340
IPR032867 DYW_dom 659 748
No external refs found!