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  5. Dcu_g43238

Dcu_g43238 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g43238
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Adi_g036766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036845 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g041239 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g066620 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087178 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03803 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03870 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04940 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05247 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05696 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06346 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06361 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06739 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06911 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12718 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18398 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18405 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18668 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19042 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22255 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g24106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g39685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55143 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55265 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59184 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g27260 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27896 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04668 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g11319 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26306 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45997 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g60651 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.09G009700.1 Ceric.09G009700 not classified & original description: pacid=50587563... 0.04 OrthoFinder output from all 47 species
Ceric.18G000100.1 CRR22, Ceric.18G000100 ssDNA-binding protein *(OSB) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.18G069700.1 CRR2, Ceric.18G069700 not classified & original description: pacid=50622363... 0.03 OrthoFinder output from all 47 species
Ceric.32G058000.1 Ceric.32G058000 not classified & original description: pacid=50598467... 0.03 OrthoFinder output from all 47 species
Ceric.33G050800.1 CRR22, Ceric.33G050800 not classified & original description: pacid=50606654... 0.03 OrthoFinder output from all 47 species
Ceric.33G060200.1 Ceric.33G060200 not classified & original description: pacid=50607485... 0.03 OrthoFinder output from all 47 species
Dcu_g12787 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17298 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45907 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g46494 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g05443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13067 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06165 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g19376 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g33833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16471 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g44175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g47300 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g47301 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51766 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g096510.3.1 Solyc12g096510 Pentatricopeptide repeat-containing protein At5g66520... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 383 407
IPR002885 Pentatricopeptide_repeat 686 709
IPR002885 Pentatricopeptide_repeat 282 304
IPR002885 Pentatricopeptide_repeat 150 171
IPR002885 Pentatricopeptide_repeat 585 610
IPR002885 Pentatricopeptide_repeat 409 456
IPR002885 Pentatricopeptide_repeat 509 556
IPR002885 Pentatricopeptide_repeat 206 254
IPR002885 Pentatricopeptide_repeat 307 355
IPR002885 Pentatricopeptide_repeat 174 204
IPR002885 Pentatricopeptide_repeat 611 657
No external refs found!