Aliases : CRR22
Description : ssDNA-binding protein *(OSB) & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00170p00032020 | OTP86,... | Pentatricopeptide repeat-containing protein At5g16860... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g008727 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g043352 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g067160 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g16835 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g25080 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g30597 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g36178 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05105 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05758 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06360 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06797 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07484 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g18037 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g18055 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18809 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g22698 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26401 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26644 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g54765 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g55221 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g55222 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g13913 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g28594 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g40871 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g41844 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0010.g012416 | No alias | not classified & original description: CDS=1-1722 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g05299 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g18809 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19907 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g19913 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g33342 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g34641 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34765 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g76301 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g76849 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g77837 | OTP86 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.03G039400.1 | Ceric.03G039400 | not classified & original description: pacid=50571919... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.06G009700.1 | VAC1, ECB2,... | not classified & original description: pacid=50619980... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.06G074600.1 | Ceric.06G074600 | not classified & original description: pacid=50619733... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.14G074100.1 | Ceric.14G074100 | not classified & original description: pacid=50633188... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.15G074900.1 | Ceric.15G074900 | not classified & original description: pacid=50640124... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.22G064700.1 | Ceric.22G064700 | not classified & original description: pacid=50614857... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.27G011400.1 | Ceric.27G011400 | not classified & original description: pacid=50605728... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.27G053200.1 | Ceric.27G053200 | not classified & original description: pacid=50604881... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.28G027300.1 | CRR22, Ceric.28G027300 | not classified & original description: pacid=50569783... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.29G060200.1 | Ceric.29G060200 | not classified & original description: pacid=50624987... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.34G063100.1 | Ceric.34G063100 | not classified & original description: pacid=50623551... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g03363 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g18761 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g24894 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g30156 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g35207 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g35460 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g35991 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g07152 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g07713 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g08084 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08479 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g08566 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08636 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g08698 | EMB2744 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08849 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08863 | EMB2758 | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Dcu_g08967 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g08971 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g09653 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g12070 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g12504 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g14666 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g16809 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g17098 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g17197 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g17233 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g26405 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g26715 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g37168 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g37654 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g38628 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g38682 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g39981 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g41902 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g44152 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g45856 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g45929 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g46395 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g47941 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g50973 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g02941 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g08678 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g28151 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g29998 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g43420.1 | OSB1, LOC_Os03g43420 | ssDNA-binding protein (OSB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os11g17530.2 | LOC_Os11g17530 | Pentatricopeptide repeat-containing protein At2g37320... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04862 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g05723 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g06251 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07374 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g07678 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07683 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07719 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07745 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g07754 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g07827 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g14703 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g22099 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g32914 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g33322 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g38033 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_77675g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g06015 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g14089 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g24337 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g31511 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g44897 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g38399 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g08941 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g20793 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g45078 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g03324 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g08446 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g32193 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g41187 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57699 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57929 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g61524 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63612 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05632 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06822 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g08795 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g30840 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g32073 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53728 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g59292 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0215.g026034 | OTP84 | not classified & original description: CDS=2081-4369 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g03385 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g11203 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16146 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g17157 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g29223 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g30171 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g50534 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g081020.1.1 | Solyc01g081020 | RNA editing factor (OTP80) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g006990.1.1 | Solyc03g006990 | Pentatricopeptide repeat-containing protein At5g66520... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g01728 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g01746 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g04791 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g14147 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g14320 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g14580 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g19945 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g20095 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g21818 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g26362 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g30672 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g46893 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g53139 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g06419 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g08446 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g12273 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g16987 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g17148 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g26731 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g26742 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g27779 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g28457 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e029186_P001 | Zm00001e029186 | Pentatricopeptide repeat-containing protein At1g19720... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000075 | cell cycle checkpoint signaling | IEP | HCCA |
| BP | GO:0000077 | DNA damage checkpoint signaling | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0007165 | signal transduction | IEP | HCCA |
| BP | GO:0010564 | regulation of cell cycle process | IEP | HCCA |
| BP | GO:0010948 | negative regulation of cell cycle process | IEP | HCCA |
| CC | GO:0030896 | checkpoint clamp complex | IEP | HCCA |
| BP | GO:0031570 | DNA integrity checkpoint signaling | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
| BP | GO:0042770 | signal transduction in response to DNA damage | IEP | HCCA |
| BP | GO:0045786 | negative regulation of cell cycle | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0048523 | negative regulation of cellular process | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0051726 | regulation of cell cycle | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| BP | GO:1901987 | regulation of cell cycle phase transition | IEP | HCCA |
| BP | GO:1901988 | negative regulation of cell cycle phase transition | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 277 | 323 |
| IPR002885 | Pentatricopeptide_repeat | 582 | 629 |
| IPR002885 | Pentatricopeptide_repeat | 176 | 222 |
| IPR002885 | Pentatricopeptide_repeat | 378 | 424 |
| IPR002885 | Pentatricopeptide_repeat | 479 | 526 |
| IPR002885 | Pentatricopeptide_repeat | 251 | 274 |
| IPR002885 | Pentatricopeptide_repeat | 556 | 581 |
| IPR002885 | Pentatricopeptide_repeat | 453 | 478 |
| IPR002885 | Pentatricopeptide_repeat | 352 | 374 |
| No external refs found! |
