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  5. Dcu_g44261

Dcu_g44261


Description : pectin methylesterase & original description: none


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g44261
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00264470 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00027p00247950 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
AMTR_s00056p00166920 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
AMTR_s00106p00092510 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.05 OrthoFinder output from all 47 species
AMTR_s00140p00036490 evm_27.TU.AmTr_v1... Probable pectinesterase 8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G05310 No alias Pectin lyase-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT2G36710 No alias Pectin lyase-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G26810 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G47500 No alias Pectin lyase-like superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g127146 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g10289 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g12748 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g16363 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g18114 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g38864 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39532 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g40489 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25187 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g26631 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12101 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Als_g18741 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06410 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22635 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01243 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02507 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g04456 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07992 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g16751 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g20021 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g20106 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g20602 No alias pectin methylesterase & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g21373 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g22415 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g25292 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g30459 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g56742 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g69965 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05718.t1 Aspi01Gene05718 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05795.t1 Aspi01Gene05795 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07316.t2 VGDH1, Aspi01Gene07316 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07325.t1 Aspi01Gene07325 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10492.t1 Aspi01Gene10492 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16842.t2 Aspi01Gene16842 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene20189.t1 Aspi01Gene20189 pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene24083.t2 Aspi01Gene24083 pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene30602.t1 Aspi01Gene30602 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene30603.t1 Aspi01Gene30603 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene31809.t1 Aspi01Gene31809 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31809.t2 Aspi01Gene31809 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33566.t1 Aspi01Gene33566 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55625.t1 Aspi01Gene55625 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59341.t1 Aspi01Gene59341 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59345.t1 Aspi01Gene59345 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70538.t1 Aspi01Gene70538 pectin methylesterase & original description: none 0.1 OrthoFinder output from all 47 species
Aspi01Gene71978.t1 Aspi01Gene71978 pectin methylesterase & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g05738 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.03G008900.1 Ceric.03G008900 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.05G031400.1 Ceric.05G031400 pectin methylesterase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.10G076400.1 Ceric.10G076400 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.24G024700.1 Ceric.24G024700 pectin methylesterase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.37G019300.1 Ceric.37G019300 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G035900.1 Ceric.39G035900 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g00830 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g05020 No alias pectin methylesterase & original description: none 0.09 OrthoFinder output from all 47 species
Dac_g09998 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g11820 No alias EC_3.1 hydrolase acting on ester bond & original... 0.09 OrthoFinder output from all 47 species
Dac_g16825 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g17627 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g20667 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31792 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11350 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g11729 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g42904 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g51244 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g13696 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g25395 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g27753 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46321 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g02245 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15499 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g18839 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31652 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013832001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01015852001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 OrthoFinder output from all 47 species
GSVIVT01028170001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01031250001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
Gb_01460 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Gb_17798 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
Gb_27225 No alias pectin methylesterase 0.05 OrthoFinder output from all 47 species
LOC_Os01g19440.1 LOC_Os01g19440 pectin methylesterase 0.04 OrthoFinder output from all 47 species
LOC_Os05g44600.1 LOC_Os05g44600 pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os09g39760.1 LOC_Os09g39760 pectin methylesterase 0.05 OrthoFinder output from all 47 species
Len_g02282 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Len_g07605 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13333 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g46556 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Len_g56779 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g09832 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g15828 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19805 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g40175 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
MA_10428610g0010 No alias pectin methylesterase 0.05 OrthoFinder output from all 47 species
MA_10428610g0020 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_14449g0010 No alias pectin methylesterase 0.07 OrthoFinder output from all 47 species
MA_181657g0020 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_19196g0010 ATPE11, PE11 pectin methylesterase 0.04 OrthoFinder output from all 47 species
MA_20853g0010 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
MA_40503g0010 ATPE11, PE11 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp2g01420.1 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Mp2g19430.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp4g01190.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp5g03920.1 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Mp5g03930.1 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Msp_g06289 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38949 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g42451 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00669 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03059 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Nbi_g03614 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g08076 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g13021 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g13329 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g14686 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27443 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g30255 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g06428 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25737 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27386 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30829 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43955 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01612 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02205 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c12_24000V3.1 Pp3c12_24000 Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g11138 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14779 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g24799 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g25901 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g29894 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g31507 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g59766 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61465 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g63851 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010091 No alias pectin methylesterase & original description: CDS=1-882 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015880 No alias pectin methylesterase & original description: CDS=354-1487 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016099 No alias pectin methylesterase & original description: CDS=1-1224 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020122 No alias not classified & original description: CDS=269-877 0.03 OrthoFinder output from all 47 species
Sam_g02095 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16125 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Smo81583 No alias Cell wall.pectin.homogalacturonan.modification and... 0.08 OrthoFinder output from all 47 species
Solyc02g075620.4.1 Solyc02g075620 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Spa_g10100 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g11483 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25777 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g29457 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g29524 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40908 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49901 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49902 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g50750 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54581 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g54582 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g01655 No alias pecTin methylesterase & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g03223 No alias pecTin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07049 No alias pecTin methylesterase & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g15602 No alias pecTin methylesterase & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g19866 No alias pecTin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g36990 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g36991 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Zm00001e027944_P002 ATPE11, PE11,... pectin methylesterase 0.02 OrthoFinder output from all 47 species
Zm00001e029074_P001 Zm00001e029074 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Zm00001e035522_P001 QRT1, Zm00001e035522 pectin methylesterase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 78 363
No external refs found!