Dcu_g44609


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g44609
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT1G13410 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G61400 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 OrthoFinder output from all 47 species
Aev_g18129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01931 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g08067 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20749 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007783 No alias not classified & original description: CDS=1-3171 0.04 OrthoFinder output from all 47 species
Azfi_s0036.g025743 No alias not classified & original description: CDS=1-2553 0.04 OrthoFinder output from all 47 species
Azfi_s0201.g057596 No alias not classified & original description: CDS=1-1803 0.05 OrthoFinder output from all 47 species
Azfi_s0652.g081079 No alias not classified & original description: CDS=1-2169 0.04 OrthoFinder output from all 47 species
Cba_g20724 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G015100.1 Ceric.04G015100 not classified & original description: pacid=50632156... 0.03 OrthoFinder output from all 47 species
Ceric.04G103400.1 Ceric.04G103400 not classified & original description: pacid=50630509... 0.03 OrthoFinder output from all 47 species
Ceric.13G082600.1 Ceric.13G082600 not classified & original description: pacid=50636923... 0.03 OrthoFinder output from all 47 species
Ceric.28G029300.1 Ceric.28G029300 not classified & original description: pacid=50569762... 0.04 OrthoFinder output from all 47 species
Ceric.28G044700.1 Ceric.28G044700 not classified & original description: pacid=50570014... 0.03 OrthoFinder output from all 47 species
Ceric.31G027200.1 OTP86, Ceric.31G027200 not classified & original description: pacid=50574199... 0.03 OrthoFinder output from all 47 species
Ceric.39G011500.1 Ceric.39G011500 not classified & original description: pacid=50582697... 0.03 OrthoFinder output from all 47 species
Dcu_g17169 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16062 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18216 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g60250.1 LOC_Os01g60250 Pentatricopeptide repeat-containing protein At3g14730... 0.03 OrthoFinder output from all 47 species
LOC_Os01g60430.1 LOC_Os01g60430 RNA editing factor (MEF10) 0.03 OrthoFinder output from all 47 species
LOC_Os04g58980.1 LOC_Os04g58980 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os07g47370.1 LOC_Os07g47370 Pentatricopeptide repeat-containing protein At4g32430,... 0.03 OrthoFinder output from all 47 species
Len_g04332 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18982 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g40999 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g12012 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10432670g0020 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_127785g0010 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
Mp5g04990.1 PTAC9, OSB2 ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
Nbi_g02383 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05303 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06160 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06751 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06814 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07857 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08329 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11918 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g13171 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13685 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16032 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g18968 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20606 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g21521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24067 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g25502 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27739 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29244 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g30381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30847 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g31889 MEF21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32180 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g34920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38541 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g41038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41042 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g43649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48950 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g114660.1.1 Solyc03g114660 Pentatricopeptide repeat-containing protein At1g18485... 0.03 OrthoFinder output from all 47 species
Tin_g03145 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26628 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g28153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35609 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g44074 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e011923_P001 Zm00001e011923 Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species
Zm00001e013232_P001 Zm00001e013232 Pentatricopeptide repeat-containing protein At2g36730... 0.03 OrthoFinder output from all 47 species
Zm00001e014549_P001 CRR22, Zm00001e014549 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR046848 E_motif 280 327
IPR002885 Pentatricopeptide_repeat 229 259
IPR002885 Pentatricopeptide_repeat 9 40
IPR002885 Pentatricopeptide_repeat 161 208
IPR002885 Pentatricopeptide_repeat 69 94
IPR002885 Pentatricopeptide_repeat 135 159
No external refs found!