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  5. Dcu_g45167

Dcu_g45167


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g45167
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
Adi_g036845 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07462 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13294 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19723 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g21955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30597 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30723 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34486 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g35754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35880 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g36178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36528 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g37466 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05107 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05758 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06012 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06261 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06398 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07147 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16416 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18804 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19109 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19136 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20750 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26377 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g28002 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05266 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g07402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22148 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27890 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g27891 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28235 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28242 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g37980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g42783 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03124 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03415 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g06104 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16533 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16842 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17678 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18280 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20531 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g27080 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28692 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28710 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g29854 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38568 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70953 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0014.g013569 No alias not classified & original description: CDS=1-2385 0.04 OrthoFinder output from all 47 species
Azfi_s0039.g026466 No alias not classified & original description: CDS=1-2883 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g029993 No alias not classified & original description: CDS=1-1878 0.04 OrthoFinder output from all 47 species
Azfi_s0210.g058082 No alias not classified & original description: CDS=1-2637 0.04 OrthoFinder output from all 47 species
Cba_g04691 EMB2261 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20802 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G076400.1 Ceric.13G076400 not classified & original description: pacid=50635248... 0.03 OrthoFinder output from all 47 species
Ceric.30G025700.1 CRR22, Ceric.30G025700 not classified & original description: pacid=50609433... 0.04 OrthoFinder output from all 47 species
Dac_g03359 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g04705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05151 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19052 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20347 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g20433 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22020 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24746 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25030 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25885 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g29963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g34941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35634 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35670 DOT4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g42862 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g44133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08313 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17233 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26818 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38639 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14702 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g40965 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05468 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20618 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43142 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03061 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g05094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53388 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g62422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29713 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55548 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g05566 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13752 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g31206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013713_P001 Zm00001e013713 Pentatricopeptide repeat-containing protein At4g20770... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 328 373
IPR002885 Pentatricopeptide_repeat 627 675
IPR002885 Pentatricopeptide_repeat 123 172
IPR002885 Pentatricopeptide_repeat 830 877
IPR002885 Pentatricopeptide_repeat 528 573
IPR002885 Pentatricopeptide_repeat 426 474
IPR002885 Pentatricopeptide_repeat 225 271
IPR002885 Pentatricopeptide_repeat 729 776
IPR002885 Pentatricopeptide_repeat 904 929
IPR002885 Pentatricopeptide_repeat 199 224
IPR002885 Pentatricopeptide_repeat 299 322
IPR002885 Pentatricopeptide_repeat 501 527
IPR002885 Pentatricopeptide_repeat 703 728
IPR002885 Pentatricopeptide_repeat 804 828
No external refs found!