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  5. Dcu_g46032

Dcu_g46032


Description : not classified & original description: none


Gene families : OG0000255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g46032
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00055400 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00048p00106110 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00136560 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT4G19590 No alias Chaperone DnaJ-domain superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g015298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g079338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087018 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g117340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32277 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14745 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g10067 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g14803 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g15964 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15965 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40019 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g50827 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18487 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene27467.t1 Aspi01Gene27467 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene42055.t1 Aspi01Gene42055 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023718 No alias not classified & original description: CDS=66-2393 0.03 OrthoFinder output from all 47 species
Azfi_s0104.g044796 No alias not classified & original description: CDS=1-3255 0.04 OrthoFinder output from all 47 species
Cba_g11872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G106900.1 Ceric.01G106900 not classified & original description: pacid=50592915... 0.03 OrthoFinder output from all 47 species
Ceric.08G052600.1 Ceric.08G052600 not classified & original description: pacid=50638471... 0.05 OrthoFinder output from all 47 species
Ceric.13G032100.1 Ceric.13G032100 not classified & original description: pacid=50635670... 0.07 OrthoFinder output from all 47 species
Ceric.1Z097000.1 Ceric.1Z097000 not classified & original description: pacid=50640979... 0.04 OrthoFinder output from all 47 species
Dac_g10821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45111 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05585 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g03863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g27141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013048001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01017824001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_17193 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g27740.3 LOC_Os01g27740 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os02g30620.3 LOC_Os02g30620 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g28310.1 LOC_Os03g28310 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g31940.1 LOC_Os04g31940 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g34440.1 LOC_Os06g34440 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g14996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19008 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g23759 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04267 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38211 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10923 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012829 No alias not classified & original description: CDS=1-1290 0.03 OrthoFinder output from all 47 species
Sam_g08458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11856 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo417753 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc01g098250.4.1 Solyc01g098250 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc05g040050.3.1 Solyc05g040050 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc08g029220.3.1 Solyc08g029220 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g17540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21993 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g11026 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e017660_P001 Zm00001e017660 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e025632_P001 Zm00001e025632 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e025633_P001 Zm00001e025633 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e028433_P001 Zm00001e028433 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e036676_P001 Zm00001e036676 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e040755_P001 Zm00001e040755 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0015833 peptide transport IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042886 amide transport IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 67 128
IPR024593 DUF3444 516 716
No external refs found!