Dcu_g46647


Description : not classified & original description: none


Gene families : OG0000642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g46647

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0130.g049026 No alias not classified & original description: CDS=251-1009 0.03 OrthoFinder output from all 47 species
Dde_g49149 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os03g50560.1 LOC_Os03g50560 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g53770.1 LOC_Os03g53770 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g07946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018884 No alias not classified & original description: CDS=125-916 0.02 OrthoFinder output from all 47 species
Solyc02g067390.3.1 Solyc02g067390 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Tin_g04360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g28029 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e036683_P001 Zm00001e036683 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e041759_P002 Zm00001e041759 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 63 122
No external refs found!