1. Home
  2. Species
  3. Dicranopteris curranii
  4. Sequence
  5. Dcu_g47236

Dcu_g47236 (MSL5)


Aliases : MSL5

Description : mechanosensitive ion channel *(MSL) & original description: none


Gene families : OG0000689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g47236
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AT2G17000 No alias Mechanosensitive ion channel family protein 0.03 OrthoFinder output from all 47 species
Aspi01Gene38455.t1 MSL5, Aspi01Gene38455 mechanosensitive ion channel *(MSL) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g03379 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.35G012600.1 MSL6, Ceric.35G012600 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021127.32 No alias No description available 0.01 OrthoFinder output from all 47 species
Nbi_g07829 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.04 OrthoFinder output from all 47 species
Smo84864 MSL6 Solute transport.channels.MSL mechanosensitive ion channel 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006685 MscS_channel 802 1005
No external refs found!