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  5. Dcu_g47629

Dcu_g47629


Description : not classified & original description: none


Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g47629

Target Alias Description ECC score Gene Family Method Actions
AT2G34660 AtABCC2, ABCC2,... multidrug resistance-associated protein 2 0.03 OrthoFinder output from all 47 species
Aev_g21167 ATMRP12, MRP12, ABCC11 subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g05096 ATMRP12, MRP12, ABCC11 subfamily ABCC transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene64352.t2 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.1Z008100.1 MRP6, ATMRP6,... not classified & original description: pacid=50571123... 0.03 OrthoFinder output from all 47 species
Ceric.21G016300.1 ATABCC5, MRP5,... subfamily ABCC transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.23G061900.1 ABCC1, ATABCC1,... subfamily ABCC transporter & original description:... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000718.1 AtABCC2, ABCC2,... ABC transporter C family member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001254.7 MRP15, ABCC15, ATMRP15 ABC transporter C family member 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre07.g325761 ATMRP8, MRP8, ABCC6 ABC transporter C family member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ehy_g04067 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g20666 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24738 ABCC12, MRP13, ATMRP13 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037789001 ABCC3, ATMRP3, MRP3 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
LOC_Os01g25386.1 EST3, MRP4,... subfamily ABCC transporter 0.03 OrthoFinder output from all 47 species
MA_138036g0010 ABCC3, ATMRP3, MRP3 subfamily ABCC transporter 0.03 OrthoFinder output from all 47 species
MA_380601g0010 MRP6, ATMRP6, ABCC8 ABC transporter C family member 8 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp2g22040.1 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter 0.02 OrthoFinder output from all 47 species
Mp4g15590.1 ATMRP14, ABCC10, MRP14 subfamily ABCC transporter 0.02 OrthoFinder output from all 47 species
Msp_g13331 ABCC12, MRP13, ATMRP13 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43737 ATMRP12, MRP12, ABCC11 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23770 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15997 ATMRP12, MRP12, ABCC11 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29473 ATMRP12, MRP12, ABCC11 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo230611 MRP11, ABCC13, ATMRP11 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo94 ATMRP12, MRP12, ABCC11 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Solyc08g006880.3.1 AtABCC2, ABCC2,... subfamily ABCC transporter 0.04 OrthoFinder output from all 47 species
Spa_g09890 ABCC12, MRP13, ATMRP13 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41487 MRP11, ABCC13, ATMRP11 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 3 114
No external refs found!