Dcu_g47661


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g47661

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00267110 OSB1,... Cell cycle.organelle machineries.DNA... 0.03 OrthoFinder output from all 47 species
AMTR_s00122p00115170 CRR21 RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
Adi_g005343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035312 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g100823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14052 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16437 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06402 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31801.t1 Aspi01Gene31801 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene65182.t1 OTP86, Aspi01Gene65182 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0020.g015553 OTP84 not classified & original description: CDS=36-2027 0.04 OrthoFinder output from all 47 species
Azfi_s0045.g030112 No alias not classified & original description: CDS=94-318 0.02 OrthoFinder output from all 47 species
Azfi_s0164.g054282 No alias not classified & original description: CDS=1-4443 0.03 OrthoFinder output from all 47 species
Azfi_s0173.g055844 CRR22 not classified & original description: CDS=1-1863 0.03 OrthoFinder output from all 47 species
Cba_g05331 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32949 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08533 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g21324 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12887 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24322 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g40646 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10023 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20585 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007811001 No alias Pentatricopeptide repeat-containing protein At3g22690... 0.02 OrthoFinder output from all 47 species
GSVIVT01035491001 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
Len_g18300 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g25719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06446 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_102449g0020 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
MA_10338179g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_65500g0010 No alias Pentatricopeptide repeat-containing protein At1g08070,... 0.02 OrthoFinder output from all 47 species
MA_681272g0010 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
MA_95507g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Msp_g10059 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g16922 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g20568 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26949 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g42868 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g46160 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16471 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g24808 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g01302 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05196 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g13992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23954 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26843 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63646 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g17865 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06278 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo45004 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Spa_g50449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013232_P001 Zm00001e013232 Pentatricopeptide repeat-containing protein At2g36730... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 130 154
IPR002885 Pentatricopeptide_repeat 435 456
IPR002885 Pentatricopeptide_repeat 54 102
IPR002885 Pentatricopeptide_repeat 358 404
IPR002885 Pentatricopeptide_repeat 156 203
IPR002885 Pentatricopeptide_repeat 256 296
No external refs found!