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  5. Dcu_g47766

Dcu_g47766


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g47766

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272900 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
AMTR_s00002p00270380 OTP86,... RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
AMTR_s00003p00263110 No alias Pentatricopeptide repeat-containing protein At1g03540... 0.02 OrthoFinder output from all 47 species
AMTR_s00011p00266560 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
AMTR_s00029p00062590 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
AMTR_s00049p00210350 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AMTR_s00056p00185560 VAC1, ECB2, ATECB2 RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00063p00172440 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
AMTR_s02193p00008230 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g02330,... 0.03 OrthoFinder output from all 47 species
AT1G18485 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G02010 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G15130 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G22150 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G23330 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G63370 OTP86 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G21300 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g004435 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004440 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g065393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g28165 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g32783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32785 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06600 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g11424 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g17260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24667 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g28308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04451 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05076 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05108 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05139 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05709 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g06396 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g06815 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06903 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07140 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07480 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09502 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g15655 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20750 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32754 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g33170 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39618 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40180 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g47378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55221 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55228 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57869 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59722 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g62803 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08458 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g09005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22756 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g24197 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g27006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27232 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27846 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g27882 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27917 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g27921 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28242 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g28679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29803 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g33250 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g34218 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37347 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37584 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37587 OTP86 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g37980 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09867 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28421 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene60513.t1 Aspi01Gene60513 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65777.t1 Aspi01Gene65777 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69669.t1 CRR22, Aspi01Gene69669 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008511 No alias not classified & original description: CDS=1-792 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010531 CRR2 not classified & original description: CDS=1-1098 0.03 OrthoFinder output from all 47 species
Azfi_s0082.g038704 No alias not classified & original description: CDS=1-2661 0.03 OrthoFinder output from all 47 species
Azfi_s0095.g043642 No alias not classified & original description: CDS=144-2255 0.04 OrthoFinder output from all 47 species
Azfi_s0139.g051153 No alias not classified & original description: CDS=1-1947 0.04 OrthoFinder output from all 47 species
Azfi_s0303.g063761 No alias not classified & original description: CDS=81-2876 0.03 OrthoFinder output from all 47 species
Azfi_s0771.g086172 CRR22 not classified & original description: CDS=1-2199 0.03 OrthoFinder output from all 47 species
Cba_g02715 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g03375 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06575 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07667 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19888 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20706 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75118 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G039400.1 Ceric.03G039400 not classified & original description: pacid=50571919... 0.03 OrthoFinder output from all 47 species
Ceric.07G081900.1 Ceric.07G081900 not classified & original description: pacid=50627936... 0.03 OrthoFinder output from all 47 species
Ceric.17G074800.1 Ceric.17G074800 not classified & original description: pacid=50618293... 0.03 OrthoFinder output from all 47 species
Ceric.28G018400.1 Ceric.28G018400 not classified & original description: pacid=50571000... 0.03 OrthoFinder output from all 47 species
Ceric.37G044800.1 Ceric.37G044800 not classified & original description: pacid=50617007... 0.03 OrthoFinder output from all 47 species
Dac_g22525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05661 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07150 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07701 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07746 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07753 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08305 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08317 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08760 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08773 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08935 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08951 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09000 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g12504 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g13518 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17301 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36344 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38694 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43222 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45932 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47765 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g48722 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50041 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03284 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46554 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51445 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15341 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003804001 CRR22 Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
GSVIVT01008656001 No alias Pentatricopeptide repeat-containing protein At5g50990... 0.03 OrthoFinder output from all 47 species
GSVIVT01008965001 No alias Pentatricopeptide repeat-containing protein At4g18520,... 0.02 OrthoFinder output from all 47 species
GSVIVT01009227001 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
GSVIVT01010898001 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.03 OrthoFinder output from all 47 species
GSVIVT01025574001 No alias Pentatricopeptide repeat-containing protein At2g37320... 0.03 OrthoFinder output from all 47 species
GSVIVT01036975001 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.04 OrthoFinder output from all 47 species
GSVIVT01037258001 No alias Pentatricopeptide repeat-containing protein At5g27110... 0.04 OrthoFinder output from all 47 species
Gb_00776 No alias Pentatricopeptide repeat-containing protein At5g50390,... 0.03 OrthoFinder output from all 47 species
Gb_21443 OTP86 Pentatricopeptide repeat-containing protein At3g63370,... 0.06 OrthoFinder output from all 47 species
LOC_Os01g60250.1 LOC_Os01g60250 Pentatricopeptide repeat-containing protein At3g14730... 0.06 OrthoFinder output from all 47 species
LOC_Os03g32620.1 LOC_Os03g32620 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os03g59264.1 LOC_Os03g59264 lectin chaperone (CRT) 0.02 OrthoFinder output from all 47 species
LOC_Os04g39410.1 OTP86, LOC_Os04g39410 RNA editing factor (OTP86) 0.03 OrthoFinder output from all 47 species
LOC_Os04g41120.1 LOC_Os04g41120 Pentatricopeptide repeat-containing protein At4g38010... 0.04 OrthoFinder output from all 47 species
LOC_Os05g12130.1 EMB2261, LOC_Os05g12130 RNA editing factor (ECD1) 0.03 OrthoFinder output from all 47 species
LOC_Os05g24150.1 LOC_Os05g24150 Pentatricopeptide repeat-containing protein At2g34400... 0.02 OrthoFinder output from all 47 species
LOC_Os05g38190.2 LOC_Os05g38190 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
LOC_Os05g49920.1 VAC1, ECB2,... RNA editing factor (ECB2/VAC1) 0.03 OrthoFinder output from all 47 species
LOC_Os06g40860.1 LOC_Os06g40860 Pentatricopeptide repeat-containing protein At1g03540... 0.03 OrthoFinder output from all 47 species
LOC_Os07g20420.1 LOC_Os07g20420 Pentatricopeptide repeat-containing protein At3g26782,... 0.03 OrthoFinder output from all 47 species
LOC_Os08g25280.1 LOC_Os08g25280 Pentatricopeptide repeat-containing protein At4g39530... 0.04 OrthoFinder output from all 47 species
LOC_Os10g34720.1 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os10g40920.1 LOC_Os10g40920 RNA editing factor (MEF13) 0.03 OrthoFinder output from all 47 species
Len_g20619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33779 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g40700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44856 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54485 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06268 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07688 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07808 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07847 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g14705 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g15174 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g23499 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g32791 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_27726g0010 VAC1, ECB2, ATECB2 RNA editing factor (ECB2/VAC1) 0.03 OrthoFinder output from all 47 species
MA_30949g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
MA_34492g0020 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_381817g0020 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
MA_4438g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_474261g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
MA_597g0020 DOT4 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_681272g0010 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
MA_8893194g0010 MEF1 RNA editing factor (MEF1) 0.03 OrthoFinder output from all 47 species
MA_94165g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Msp_g17466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g18639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05890 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06751 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08941 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19928 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g22460 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37890 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40890 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09788 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12589 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19712 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63645 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g26402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03894 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10335 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g44900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010805 VAC1, ECB2, ATECB2 not classified & original description: CDS=294-2756 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023714 No alias not classified & original description: CDS=1-2772 0.03 OrthoFinder output from all 47 species
Sam_g27788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36579 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50566 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo107423 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.03 OrthoFinder output from all 47 species
Smo109283 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
Smo79052 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Smo90563 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
Smo98955 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Smo99756 No alias Pentatricopeptide repeat-containing protein At2g39620... 0.05 OrthoFinder output from all 47 species
Solyc01g108180.4.1 Solyc01g108180 RNA editing factor (MEF8). RNA editing factor (BLX) 0.07 OrthoFinder output from all 47 species
Solyc03g119950.1.1 VAC1, ECB2,... RNA editing factor (ECB2/VAC1) 0.03 OrthoFinder output from all 47 species
Solyc08g013850.1.1 CRR21, Solyc08g013850 RNA editing factor (CRR21) 0.03 OrthoFinder output from all 47 species
Solyc09g090220.3.1 Solyc09g090220 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc12g099850.1.1 Solyc12g099850 Pentatricopeptide repeat-containing protein At1g18485... 0.05 OrthoFinder output from all 47 species
Spa_g28927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04733 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06127 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g17410 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g17629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28890 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g36263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g39845 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001007_P001 Zm00001e001007 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Zm00001e001038_P001 CRR2, Zm00001e001038 Pentatricopeptide repeat-containing protein At1g08070,... 0.02 OrthoFinder output from all 47 species
Zm00001e002552_P001 Zm00001e002552 RNA editing factor (SEL1/PDM1) 0.03 OrthoFinder output from all 47 species
Zm00001e005246_P001 Zm00001e005246 Pentatricopeptide repeat-containing protein At2g41080... 0.02 OrthoFinder output from all 47 species
Zm00001e007042_P001 Zm00001e007042 RNA editing factor (AEF1) 0.03 OrthoFinder output from all 47 species
Zm00001e013713_P001 Zm00001e013713 Pentatricopeptide repeat-containing protein At4g20770... 0.03 OrthoFinder output from all 47 species
Zm00001e015440_P001 CRR22, Zm00001e015440 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Zm00001e015695_P001 Zm00001e015695 Pentatricopeptide repeat-containing protein At4g16835,... 0.04 OrthoFinder output from all 47 species
Zm00001e020442_P001 Zm00001e020442 Pentatricopeptide repeat-containing protein At4g21300... 0.04 OrthoFinder output from all 47 species
Zm00001e020567_P001 Zm00001e020567 RNA editing factor (MEF7) 0.03 OrthoFinder output from all 47 species
Zm00001e021457_P001 CRR22, Zm00001e021457 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Zm00001e023498_P001 VAC1, ECB2,... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Zm00001e029186_P001 Zm00001e029186 Pentatricopeptide repeat-containing protein At1g19720... 0.03 OrthoFinder output from all 47 species
Zm00001e031660_P001 Zm00001e031660 Pentatricopeptide repeat-containing protein At4g14170... 0.02 OrthoFinder output from all 47 species
Zm00001e040920_P001 Zm00001e040920 Pentatricopeptide repeat-containing protein At3g26540... 0.03 OrthoFinder output from all 47 species
Zm00001e041694_P001 Zm00001e041694 Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 860 921
IPR002885 Pentatricopeptide_repeat 212 236
IPR002885 Pentatricopeptide_repeat 817 841
IPR046849 Eplus_motif 927 954
IPR002885 Pentatricopeptide_repeat 238 285
IPR002885 Pentatricopeptide_repeat 742 789
IPR002885 Pentatricopeptide_repeat 641 690
IPR002885 Pentatricopeptide_repeat 440 488
IPR002885 Pentatricopeptide_repeat 339 385
IPR002885 Pentatricopeptide_repeat 138 184
IPR002885 Pentatricopeptide_repeat 541 587
No external refs found!