Dcu_g47811


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g47811

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00228270 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00031p00067070 emb1899, EMB175, EMB166 Pentatricopeptide repeat-containing protein At5g03800... 0.02 OrthoFinder output from all 47 species
AMTR_s00032p00177680 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00077p00031710 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
AT1G15510 VAC1, ECB2, ATECB2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G57430 OTP84 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g004345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g012996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058970 RARE1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g095327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04672 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06921 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17617 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g19914 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32791 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35633 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g37466 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16270 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26421 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32003 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g39787 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55143 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05074 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g11891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09742 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29262 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene71957.t1 EMB2261, Aspi01Gene71957 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0063.g035318 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-1986 0.04 OrthoFinder output from all 47 species
Cba_g03313 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g04666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04696 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g05310 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g06540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07325 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07680 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07735 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19882 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20706 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g23308 OSB4 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g25572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29385 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29871 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g31684 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g31693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35110 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g44396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45574 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g57497 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67766 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74755 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75136 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G041400.1 Ceric.01G041400 not classified & original description: pacid=50592429... 0.03 OrthoFinder output from all 47 species
Ceric.09G092300.1 Ceric.09G092300 not classified & original description: pacid=50588334... 0.04 OrthoFinder output from all 47 species
Ceric.29G051500.1 Ceric.29G051500 not classified & original description: pacid=50625217... 0.04 OrthoFinder output from all 47 species
Dac_g03990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23468 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g37341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08937 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50085 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51083 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26859 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09988 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01003957001 No alias Pentatricopeptide repeat-containing protein At5g65570... 0.03 OrthoFinder output from all 47 species
GSVIVT01017365001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01017996001 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.04 OrthoFinder output from all 47 species
GSVIVT01021268001 No alias Pentatricopeptide repeat-containing protein At4g18840... 0.03 OrthoFinder output from all 47 species
GSVIVT01021756001 No alias Pentatricopeptide repeat-containing protein At4g21300... 0.04 OrthoFinder output from all 47 species
GSVIVT01036511001 No alias RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
Len_g02877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17343 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18498 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18506 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g24103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26572 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_123466g0010 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Msp_g11358 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g15850 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g19143 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g27065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31349 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41092 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g44114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06770 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07593 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g22117 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g22746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09259 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g12697 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20377 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37890 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02848 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11574 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11772 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g14507 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_4890V3.1 Pp3c17_4890 mitochondrial editing factor 22 0.01 OrthoFinder output from all 47 species
Ppi_g03900 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10348 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52997 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53982 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55132 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002209 No alias not classified & original description: CDS=347-2416 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003613 No alias not classified & original description: CDS=279-3914 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007679 OTP86 not classified & original description: CDS=1-4497 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008651 No alias not classified & original description: CDS=88-3096 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018780 No alias not classified & original description: CDS=1-2574 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0164.g024060 No alias not classified & original description: CDS=1-2526 0.03 OrthoFinder output from all 47 species
Sam_g09699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17518 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g19471 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25159 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37213 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g45851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g46633 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g51209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20961 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22746 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g24828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27339 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g30253 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30419 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30433 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e029186_P001 Zm00001e029186 Pentatricopeptide repeat-containing protein At1g19720... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 298 346
IPR002885 Pentatricopeptide_repeat 498 544
IPR002885 Pentatricopeptide_repeat 801 848
IPR002885 Pentatricopeptide_repeat 700 748
IPR002885 Pentatricopeptide_repeat 599 646
IPR002885 Pentatricopeptide_repeat 197 244
IPR002885 Pentatricopeptide_repeat 397 444
IPR002885 Pentatricopeptide_repeat 96 143
IPR046848 E_motif 919 968
IPR002885 Pentatricopeptide_repeat 876 900
IPR002885 Pentatricopeptide_repeat 372 395
IPR002885 Pentatricopeptide_repeat 171 195
IPR002885 Pentatricopeptide_repeat 776 800
No external refs found!