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  5. Dcu_g47815

Dcu_g47815 (PGP11)


Aliases : PGP11

Description : not classified & original description: none


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g47815
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00263610 ABCB19,... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
AMTR_s00049p00128390 PGP16,... ABC transporter B family member 16 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00049p00128460 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G47000 ATPGP4, PGP4, ABCB4, MDR4 ATP binding cassette subfamily B4 0.07 OrthoFinder output from all 47 species
AT3G28360 PGP16 P-glycoprotein 16 0.03 OrthoFinder output from all 47 species
AT3G62150 PGP21 P-glycoprotein 21 0.02 OrthoFinder output from all 47 species
Als_g39233 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g06806 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38133 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12320.t1 PGP2, Aspi01Gene12320 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene46501.t1 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64232.t1 PGP11, Aspi01Gene64232 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0039.g026389 PGP11 subfamily ABCB transporter & original description: CDS=323-4378 0.01 OrthoFinder output from all 47 species
Azfi_s0208.g057960 PGP2 not classified & original description: CDS=388-3987 0.02 OrthoFinder output from all 47 species
Cba_g75977 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g26046 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g33169 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g41259 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Gb_07563 ABCB19,... subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
Gb_32125 PGP11 subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
Gb_36503 No alias serine carboxypeptidase. subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
LOC_Os01g50160.1 PGP11, LOC_Os01g50160 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
LOC_Os02g09720.1 LOC_Os02g09720 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Len_g04845 PGP20 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
MA_10432922g0010 No alias subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
MA_10436810g0020 No alias subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
MA_107576g0010 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
MA_145496g0010 No alias ABC transporter B family member 15 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_8590327g0010 No alias ABC transporter B family member 17 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_9148200g0010 No alias ABC transporter B family member 15 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_937278g0010 PGP17 ABC transporter B family member 17 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Msp_g32270 No alias subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g18266 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g29613 PGP11 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g04029 PGP11 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g20355 PGP21 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g04001 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018197 ABCB19,... subfamily ABCB transporter & original description: CDS=226-4089 0.01 OrthoFinder output from all 47 species
Sam_g27139 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g010310.4.1 PGP20, Solyc04g010310 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Zm00001e041087_P002 Zm00001e041087 subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 47 113
No external refs found!