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  5. Dcu_g47931

Dcu_g47931


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g47931
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00232p00000850 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g21090... 0.03 OrthoFinder output from all 47 species
Aev_g07452 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g17904 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g25276 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g46748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g47897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16780 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17318 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene14860.t1 Aspi01Gene14860 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20358.t1 Aspi01Gene20358 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44213.t1 Aspi01Gene44213 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06483 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07157 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20826 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29942 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g74880 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.05G079500.1 Ceric.05G079500 not classified & original description: pacid=50579193... 0.04 OrthoFinder output from all 47 species
Ceric.10G013000.1 EMB2758, Ceric.10G013000 not classified & original description: pacid=50613337... 0.06 OrthoFinder output from all 47 species
Ceric.19G000700.1 VAC1, ECB2,... not classified & original description: pacid=50576122... 0.05 OrthoFinder output from all 47 species
Dac_g03373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g03846 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g06637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09139 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15109 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19039 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g20899 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g24501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g29379 OTP85 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g30064 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g31017 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g39373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44991 LOI1, MEF11 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07083 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07713 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g16793 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g16911 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17233 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g21230 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37654 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38468 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38682 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g40949 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g47765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50188 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
LOC_Os06g08650.1 LOC_Os06g08650 Pentatricopeptide repeat-containing protein At2g03380,... 0.03 OrthoFinder output from all 47 species
LOC_Os06g08660.1 LOC_Os06g08660 Pentatricopeptide repeat-containing protein At4g30700... 0.07 OrthoFinder output from all 47 species
Lfl_g03483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06715 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07379 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07683 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07711 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g08372 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14746 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g17485 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03944 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g04292 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g10444 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g12697 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g43621 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c17_4890V3.1 Pp3c17_4890 mitochondrial editing factor 22 0.02 OrthoFinder output from all 47 species
Sam_g33706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 460 507
IPR002885 Pentatricopeptide_repeat 561 608
IPR002885 Pentatricopeptide_repeat 158 206
IPR002885 Pentatricopeptide_repeat 359 406
IPR002885 Pentatricopeptide_repeat 258 306
IPR002885 Pentatricopeptide_repeat 637 657
IPR002885 Pentatricopeptide_repeat 233 257
IPR002885 Pentatricopeptide_repeat 334 357
IPR002885 Pentatricopeptide_repeat 665 695
No external refs found!