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  5. Dcu_g48673

Dcu_g48673


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g48673
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00031p00067070 emb1899, EMB175, EMB166 Pentatricopeptide repeat-containing protein At5g03800... 0.03 OrthoFinder output from all 47 species
AMTR_s00046p00214930 CRR22,... Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
AMTR_s00049p00210350 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AT1G11290 CRR22 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G15510 VAC1, ECB2, ATECB2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G56570 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G22150 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G18750 DOT4 Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G03800 emb1899, EMB175, EMB166 Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g003354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016795 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g024957 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g108176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g112132 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06301 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05719 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57094 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27009 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02901 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08270 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13985 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23792 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28232 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33599 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g029919 No alias not classified & original description: CDS=1-2448 0.03 OrthoFinder output from all 47 species
Azfi_s0127.g048709 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2400 0.04 OrthoFinder output from all 47 species
Cba_g05760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19896 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20783 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29994 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35191 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G018200.1 OTP84, Ceric.04G018200 not classified & original description: pacid=50630783... 0.03 OrthoFinder output from all 47 species
Ceric.04G106200.1 Ceric.04G106200 not classified & original description: pacid=50630879... 0.03 OrthoFinder output from all 47 species
Ceric.04G112800.1 Ceric.04G112800 not classified & original description: pacid=50632583... 0.04 OrthoFinder output from all 47 species
Ceric.11G085300.1 Ceric.11G085300 not classified & original description: pacid=50596385... 0.04 OrthoFinder output from all 47 species
Ceric.14G074100.1 Ceric.14G074100 not classified & original description: pacid=50633188... 0.03 OrthoFinder output from all 47 species
Ceric.23G059700.1 CRR22, Ceric.23G059700 not classified & original description: pacid=50609689... 0.04 OrthoFinder output from all 47 species
Ceric.23G075300.1 Ceric.23G075300 not classified & original description: pacid=50609898... 0.03 OrthoFinder output from all 47 species
Ceric.27G018200.1 Ceric.27G018200 not classified & original description: pacid=50604999... 0.06 OrthoFinder output from all 47 species
Ceric.31G026600.1 CRR22, Ceric.31G026600 not classified & original description: pacid=50574263... 0.04 OrthoFinder output from all 47 species
Ceric.32G058000.1 Ceric.32G058000 not classified & original description: pacid=50598467... 0.04 OrthoFinder output from all 47 species
Dac_g15344 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16666 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g16628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16911 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18063 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g35725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36038 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000719001 OSB1 Cell cycle.organelle machineries.DNA... 0.02 OrthoFinder output from all 47 species
GSVIVT01009227001 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
GSVIVT01010031001 No alias RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01011333001 SLO1 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
LOC_Os01g08120.1 OTP81, LOC_Os01g08120 RNA editing factor (OTP81) 0.03 OrthoFinder output from all 47 species
LOC_Os02g49830.1 LOC_Os02g49830 Pentatricopeptide repeat-containing protein At3g22690... 0.03 OrthoFinder output from all 47 species
LOC_Os03g04390.1 LOC_Os03g04390 Pentatricopeptide repeat-containing protein At4g35130,... 0.06 OrthoFinder output from all 47 species
LOC_Os03g59264.1 LOC_Os03g59264 lectin chaperone (CRT) 0.04 OrthoFinder output from all 47 species
LOC_Os04g39410.1 OTP86, LOC_Os04g39410 RNA editing factor (OTP86) 0.06 OrthoFinder output from all 47 species
LOC_Os10g34720.1 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g18537 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g19014 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g07116 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07741 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33303 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17470 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03547 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06876 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g20419 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g20604 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27843 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g29922 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g32642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12907 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g13299 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g18691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30175 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32143 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g34092 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g30877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03900 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04624 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04637 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06278 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g07521 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33298 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g36021 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g48204 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54649 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56302 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59297 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0078.g017683 No alias not classified & original description: CDS=1-2736 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019397 No alias not classified & original description: CDS=1-2220 0.03 OrthoFinder output from all 47 species
Sam_g03180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g04342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g05036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11913 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14924 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17157 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g17245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29223 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38908 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g39953 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50534 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g081020.1.1 Solyc01g081020 RNA editing factor (OTP80) 0.03 OrthoFinder output from all 47 species
Solyc11g065250.1.1 EMB2744, Solyc11g065250 Pentatricopeptide repeat-containing protein At5g39680... 0.03 OrthoFinder output from all 47 species
Spa_g26112 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g44822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17816 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g31905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44229 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000301_P001 Zm00001e000301 Pentatricopeptide repeat-containing protein At4g35130,... 0.04 OrthoFinder output from all 47 species
Zm00001e007042_P001 Zm00001e007042 RNA editing factor (AEF1) 0.05 OrthoFinder output from all 47 species
Zm00001e021457_P001 CRR22, Zm00001e021457 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Zm00001e023498_P001 VAC1, ECB2,... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Zm00001e029186_P001 Zm00001e029186 Pentatricopeptide repeat-containing protein At1g19720... 0.07 OrthoFinder output from all 47 species
Zm00001e031351_P001 EMB2261, Zm00001e031351 RNA editing factor (ECD1) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 96 129
IPR002885 Pentatricopeptide_repeat 54 77
IPR002885 Pentatricopeptide_repeat 2 51
No external refs found!