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  5. Aspi01Gene00505.t1

Aspi01Gene00505.t1 (ATEXPA10, AT-EXP10,...)


Aliases : ATEXPA10, AT-EXP10, ATEXP10, EXPA10, EXP10, ATHEXP ALPHA 1.1, Aspi01Gene00505

Description : alpha-class expansin & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene00505.t1

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene00387.t1 ATEXPA10,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene08256.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14343.t1 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40971.t1 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene66973.t1 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66977.t1 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28211 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g07848 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27323 ATEXP14, EXPA14,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006536 ATEXPA10,... alpha-class expansin & original description: CDS=1521-2813 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019977 ATEXPA4, ATEXP4,... alpha-class expansin & original description: CDS=392-1180 0.01 OrthoFinder output from all 47 species
Solyc08g007090.3.1 Solyc08g007090 Expansin-like B1 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
Solyc08g077330.3.1 ATHEXP BETA 3.1,... beta-like-class expansin 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 95 180
IPR007117 Expansin_CBD 191 268
No external refs found!