Aspi01Gene02127.t1 (PEN3, ABCG36, ATPDR8,...)

Aliases : PEN3, ABCG36, ATPDR8, ATABCG36, PDR8, Aspi01Gene02127

Description : subfamily ABCG transporter & original description: none

Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene02127.t1

Target	Alias	Description	ECC score	Gene Family Method
Aob_g28174	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0734.g084221	ATPDR7, PDR7	subfamily ABCG transporter & original description: CDS=3970-4344	0.03	OrthoFinder output from all 47 species
LOC_Os12g13720.1	ATPDR5, PDR5,...	subfamily ABCG transporter	0.07	OrthoFinder output from all 47 species
MA_10437197g0020	PDR6, ATPDR6	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
MA_17319g0020	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Spa_g18419	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g39516	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g31248	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e027850_P001	ABCG40, PDR12,...	subfamily ABCG transporter	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	495	705
IPR013525	ABC_2_trans	1163	1375
IPR013581	PDR_assoc	726	780
IPR029481	ABC_trans_N	77	132
IPR003439	ABC_transporter-like_ATP-bd	158	341
IPR043926	ABCG_dom	373	423
IPR043926	ABCG_dom	1046	1107
IPR003439	ABC_transporter-like_ATP-bd	865	1017

External Links

No external refs found!