Aliases : COBL1, Aspi01Gene03097
Description : regulatory protein *(COB) of cellulose-hemicellulose network assembly & original description: none
Gene families : OG0000498 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000498_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00008p00083860 | COB,... | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00047p00216570 | IRX6, COBL4,... | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00066p00182490 | COBL10,... | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G15630 | IRX6, COBL4 | COBRA-like extracellular glycosyl-phosphatidyl... | 0.05 | OrthoFinder output from all 47 species | |
| AT5G49270 | COBL9, MRH4, SHV2, DER9 | COBRA-like extracellular glycosyl-phosphatidyl... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G60920 | COB | COBRA-like extracellular glycosyl-phosphatidyl... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g021949 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g17419 | COB | regulatory protein *(COB) of cellulose-hemicellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g14783 | COB | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g00864 | No alias | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g19185 | COB | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene04685.t1 | COBL1, Aspi01Gene04685 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.07 | OrthoFinder output from all 47 species | |
| Aspi01Gene35118.t1 | COBL2, Aspi01Gene35118 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.16G001100.1 | COB, Ceric.16G001100 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.33G061400.1 | COB, Ceric.33G061400 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g40673 | COBL2 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008129001 | IRX6, COBL4 | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01012641001 | COBL10 | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01036565001 | IRX6, COBL4 | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_36719 | IRX6, COBL4 | COB cellulose microfibrils and hemicellulose interaction protein | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g30250.1 | IRX6, COBL4,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g54750.1 | COB, LOC_Os03g54750 | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g32110.1 | COB, LOC_Os05g32110 | COB cellulose microfibrils and hemicellulose interaction protein | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g41320.1 | IRX6, COBL4,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g38435 | COBL2 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| MA_124486g0010 | COBL2 | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | OrthoFinder output from all 47 species | |
| MA_4056g0010 | COB | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species | |
| MA_40967g0020 | COB | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g18890.1 | COBL10 | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g04364 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g28352 | COBL2 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g28453 | COB | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g20839 | COB | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0007.g003619 | IRX6, COBL4 | not classified & original description: CDS=2365-3129 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0125.g021681 | IRX6, COBL4 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.06 | OrthoFinder output from all 47 species | |
| Smo271954 | COBL1 | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g065765.1.1 | COB, Solyc02g065765 | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g089130.4.1 | IRX6, COBL4,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g070440.4.1 | IRX6, COBL4,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g114900.3.1 | IRX6, COBL4,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g114910.4.1 | COB, Solyc03g114910 | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g064200.4.1 | COBL10, Solyc07g064200 | COB cellulose microfibrils and hemicellulose interaction protein | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g006450.3.1 | COBL10, Solyc10g006450 | COB cellulose microfibrils and hemicellulose interaction protein | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g13676 | COBL1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g24271 | COBL1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e012022_P001 | COB, Zm00001e012022 | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e035133_P001 | COBL10, Zm00001e035133 | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e035505_P001 | IRX6, COBL4,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e038043_P001 | IRX6, COBL4,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0010215 | cellulose microfibril organization | IEA | Interproscan |
| CC | GO:0016020 | membrane | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006918 | COBRA_pln | 51 | 214 |
| No external refs found! |
