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  5. Aspi01Gene04343.t1

Aspi01Gene04343.t1 (MRP6, ATMRP6, ABCC8,...)


Aliases : MRP6, ATMRP6, ABCC8, Aspi01Gene04343

Description : subfamily ABCC transporter & original description: none


Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene04343.t1

Target Alias Description ECC score Gene Family Method Actions
Aev_g09993 ATMRP14, ABCC10, MRP14 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g47598 ATMRP14, ABCC10, MRP14 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g17831 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70285 MRP9, ABCC9, ATMRP9 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26415.t1 EST3, MRP4,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.18G065700.1 EST3, MRP4,... subfamily ABCC transporter & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000718.1 AtABCC2, ABCC2,... ABC transporter C family member 2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000718.2 AtABCC2, ABCC2,... ABC transporter C family member 2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000718.3 ATMRP8, MRP8, ABCC6 ABC transporter C family member 6 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001024.2 AtABCC2, ABCC2,... ABC transporter C family member 14 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001729.6 ABCC1, ATABCC1,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.190 ATABCC5, MRP5,... ABC transporter C family member 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.191 ATMRP12, MRP12, ABCC11 ABC transporter C family member 11 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020592.4 ATMRP12, MRP12, ABCC11 ABC transporter C family member 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre04.g228650 AtABCC2, ABCC2,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Cre13.g564900 AtABCC2, ABCC2,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Dac_g05534 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g12889 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g27864 ABCC3, ATMRP3, MRP3 subfamily ABCC transporter & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g31128 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01021595001 AtABCC2, ABCC2,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Gb_12836 ATMRP14, ABCC10, MRP14 ABC transporter C family member 10 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Len_g24237 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33433 MRP9, ABCC9, ATMRP9 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_11781g0020 MRP6, ATMRP6, ABCC8 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_602830g0010 ATMRP14, ABCC10, MRP14 ABC transporter C family member 10 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp5g06790.1 ABCC1, ATABCC1,... subfamily ABCC transporter 0.02 OrthoFinder output from all 47 species
Smo165716 ATMRP14, ABCC10, MRP14 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Spa_g20529 MRP6, ATMRP6, ABCC8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45071 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e026288_P002 MRP10, ATMRP10,... subfamily ABCC transporter 0.04 OrthoFinder output from all 47 species
Zm00001e038918_P002 ABCC3, ATMRP3,... subfamily ABCC transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 433 566
IPR003439 ABC_transporter-like_ATP-bd 979 1127
IPR011527 ABC1_TM_dom 99 356
IPR011527 ABC1_TM_dom 708 891
No external refs found!