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  5. Aspi01Gene04828.t1

Aspi01Gene04828.t1 (UBQ11, Aspi01Gene04828)


Aliases : UBQ11, Aspi01Gene04828

Description : UBQ ubiquitin-fold protein & original description: none


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene04828.t1
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT1G11980 RUB3 ubiquitin-related protein 3 0.03 OrthoFinder output from all 47 species
Adi_g119828 UBQ11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23132.t1 UBQ4, Aspi01Gene23132 UBQ ubiquitin-fold protein & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.05G024100.1 UBQ11, Ceric.05G024100 UBQ ubiquitin-fold protein & original description:... 0.02 OrthoFinder output from all 47 species
Gb_35273 UBQ10 ubiquitin-fold protein (UBQ) 0.04 OrthoFinder output from all 47 species
LOC_Os10g39590.1 LOC_Os10g39590 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_4040g0010 UBQ11 ubiquitin-fold protein (UBQ) 0.02 OrthoFinder output from all 47 species
Mp7g12490.1 No alias component RPL40 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Ppi_g25580 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Smo271198 UBQ4 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Solyc09g098385.1.1 Solyc09g098385 Ubiquitin-40S ribosomal protein S27a OS=Solanum... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 155 226
IPR000626 Ubiquitin-like_dom 79 150
IPR000626 Ubiquitin-like_dom 3 74
No external refs found!