Aspi01Gene07542.t2 (Aspi01Gene07542)


Aliases : Aspi01Gene07542

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene07542.t2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00113040 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g65570... 0.03 OrthoFinder output from all 47 species
Aev_g40807 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g17651 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26450 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g05709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g30821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55028 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009022 No alias not classified & original description: CDS=1-2334 0.01 OrthoFinder output from all 47 species
Azfi_s0015.g013978 CRR22 not classified & original description: CDS=1-2136 0.01 OrthoFinder output from all 47 species
Azfi_s0028.g023921 No alias not classified & original description: CDS=1-2157 0.01 OrthoFinder output from all 47 species
Azfi_s0045.g029773 No alias not classified & original description: CDS=1-489 0.03 OrthoFinder output from all 47 species
Azfi_s0065.g035815 No alias not classified & original description: CDS=1-2163 0.01 OrthoFinder output from all 47 species
Cba_g13662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G008800.1 Ceric.20G008800 not classified & original description: pacid=50566037... 0.03 OrthoFinder output from all 47 species
Dac_g39198 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g03929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26396 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029254001 OSB4 RNA biosynthesis.organelle machineries.RNA polymerase... 0.01 OrthoFinder output from all 47 species
LOC_Os09g34870.1 LOC_Os09g34870 Pentatricopeptide repeat-containing protein At2g36980,... 0.01 OrthoFinder output from all 47 species
Len_g05304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55821 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g11799 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g36699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_863836g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.01 OrthoFinder output from all 47 species
Msp_g22363 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g06769 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19044 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g14266 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g03406 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12416 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12550 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13363 MEF22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g44175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g29961 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11096 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13105 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57859 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0139.g022629 No alias not classified & original description: CDS=614-2965 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0140.g022718 No alias not classified & original description: CDS=1-2991 0.02 OrthoFinder output from all 47 species
Sam_g51436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo100216 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Spa_g20461 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g29098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 303 351
IPR002885 Pentatricopeptide_repeat 404 450
IPR002885 Pentatricopeptide_repeat 100 144
IPR002885 Pentatricopeptide_repeat 505 551
IPR002885 Pentatricopeptide_repeat 606 653
IPR002885 Pentatricopeptide_repeat 580 602
IPR002885 Pentatricopeptide_repeat 207 237
IPR002885 Pentatricopeptide_repeat 277 302
No external refs found!