Aspi01Gene07578.t1 (Aspi01Gene07578)

Aliases : Aspi01Gene07578

Description : subfamily ABCG transporter & original description: none

Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene07578.t1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00181450	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.06	OrthoFinder output from all 47 species
AMTR_s00060p00208620	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.05	OrthoFinder output from all 47 species
AMTR_s00063p00178530	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AMTR_s00075p00150250	evm_27.TU.AmTr_v1...	ABC transporter G family member 8 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AT2G13610	No alias	ABC-2 type transporter family protein	0.03	OrthoFinder output from all 47 species
AT3G55110	No alias	ABC-2 type transporter family protein	0.05	OrthoFinder output from all 47 species
AT5G52860	No alias	ABC-2 type transporter family protein	0.06	OrthoFinder output from all 47 species
Cba_g03340	No alias	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g34793	No alias	ABC-G-type lipid transporter *(STR) & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g38683	No alias	ABC-G-type lipid transporter *(STR) & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g25458	WBC19, ATWBC19	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g25490	No alias	ABC-G-type lipid transporter *(STR) & original description: none	0.04	OrthoFinder output from all 47 species
Gb_20468	No alias	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
LOC_Os01g42900.1	LOC_Os01g42900	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
LOC_Os03g17350.1	LOC_Os03g17350	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
LOC_Os06g30730.1	LOC_Os06g30730	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
MA_103974g0010	No alias	ABC transporter G family member 5 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Mp5g04860.1	No alias	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Mp5g05620.1	No alias	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Nbi_g11905	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g26286	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g31857	No alias	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Solyc03g113690.1.1	Solyc03g113690	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Solyc05g054890.4.1	Solyc05g054890	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Tin_g40276	No alias	ABC-G-type lipid transporter *(STR) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e019365_P001	Zm00001e019365	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Zm00001e020697_P001	Zm00001e020697	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	430	638
IPR003439	ABC_transporter-like_ATP-bd	109	261

External Links

No external refs found!

Aspi01Gene07578.t1 (Aspi01Gene07578)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation