Aspi01Gene08455.t1 (PGP11, Aspi01Gene08455)

Aliases : PGP11, Aspi01Gene08455

Description : subfamily ABCB transporter & original description: none

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene08455.t1
Cluster	HCCA: Cluster_121

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00263610	ABCB19,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
AMTR_s00049p00128080	evm_27.TU.AmTr_v1...	Putative multidrug resistance protein OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
AMTR_s00076p00195870	PGP1, ABCB1,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AT3G55320	PGP20	P-glycoprotein 20	0.01	OrthoFinder output from all 47 species
Adi_g080508	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g087129	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g088971	No alias	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g16048	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Als_g05763	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g33230	ABCB14, ATABCB14, PGP14	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g19030	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g24610	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g14003	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g38133	No alias	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene08454.t1	PGP11, Aspi01Gene08454	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene15961.t1	ABCB19,...	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene28299.t1	Aspi01Gene28299	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Azfi_s0039.g026389	PGP11	subfamily ABCB transporter & original description: CDS=323-4378	0.05	OrthoFinder output from all 47 species
Cba_g75977	No alias	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g35627	PGP2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g40237	ABCB19,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g45466	PGP11	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g07186	ATPGP4, PGP4, ABCB4, MDR4	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01028256001	PGP11	Solute transport.primary active transport.ABC...	0.05	OrthoFinder output from all 47 species
Gb_02468	No alias	subfamily ABCB transporter	0.06	OrthoFinder output from all 47 species
Gb_13909	PGP2	ABC transporter B family member 2 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species
Gb_36497	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
LOC_Os01g50070.1	LOC_Os01g50070	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
LOC_Os01g50160.1	PGP11, LOC_Os01g50160	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
LOC_Os02g09720.1	LOC_Os02g09720	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
LOC_Os08g05690.1	ABCB19,...	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
MA_10432922g0010	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
MA_10436810g0010	No alias	Putative multidrug resistance protein OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
MA_10436810g0020	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
MA_107576g0010	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
MA_114017g0010	No alias	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
MA_1824g0020	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
MA_18863g0020	PGP3, MDR3	ABC transporter B family member 3 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_8519205g0010	PGP17	ABC transporter B family member 17 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_8590327g0010	No alias	ABC transporter B family member 17 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_9148200g0010	No alias	ABC transporter B family member 15 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_937278g0010	PGP17	ABC transporter B family member 17 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_9589971g0010	PGP10	ABC transporter B family member 10 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Mp2g06270.1	PGP20	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Mp3g11830.1	ABCB19,...	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Mp7g04390.1	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Msp_g17749	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g36979	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g30543	PGP18	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g64430	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g12991	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c17_16450V3.1	ABCB19,...	ATP binding cassette subfamily B19	0.02	OrthoFinder output from all 47 species
Ppi_g07008	ABCB14, ATABCB14, PGP14	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g13619	No alias	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g17867	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g22415	ABCB19,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g29797	PGP6	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000035	PGP13	subfamily ABCB transporter & original description: CDS=555-4511	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012919	ABCB19,...	subfamily ABCB transporter & original description: CDS=118-4143	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014291	PGP2	subfamily ABCB transporter & original description: CDS=1-4248	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017899	PGP11	subfamily ABCB transporter & original description: CDS=362-4450	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022862	No alias	not classified & original description: CDS=281-511	0.03	OrthoFinder output from all 47 species
Sam_g03287	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g32980	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc06g009280.1.1	PGP11, Solyc06g009280	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Solyc06g009290.4.1	PGP21, Solyc06g009290	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Solyc07g064120.2.1	Solyc07g064120	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Solyc12g098840.3.1	PGP11, Solyc12g098840	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Spa_g18839	ABCB19,...	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g35292	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g35652	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g46427	ATPGP4, PGP4, ABCB4, MDR4	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e025063_P001	Zm00001e025063	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	327	474
IPR011527	ABC1_TM_dom	26	257

External Links

No external refs found!

Aspi01Gene08455.t1 (PGP11, Aspi01Gene08455)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation