Aspi01Gene08571.t1 (TUB6, Aspi01Gene08571)

Aliases : TUB6, Aspi01Gene08571

Description : beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer & original description: none

Gene families : OG0000152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene08571.t1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00251790	TUB8,...	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
AMTR_s00009p00255970	TUB8,...	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
AT2G29550	TUB7	tubulin beta-7 chain	0.03	OrthoFinder output from all 47 species
AT5G12250	TUB6	beta-6 tubulin	0.03	OrthoFinder output from all 47 species
Adi_g015560	TUB8	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g040881	TUB7	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g075879	TUB2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g085232	TUB7	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g085233	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Adi_g094247	TUB8	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g100099	TUB1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g100349	TUB1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g101044	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Adi_g107584	TUB2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g22693	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Als_g10859	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Aob_g08895	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Ceric.04G002000.1	TUB2, Ceric.04G002000	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Dcu_g08335	TUB7	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g13446	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Gb_15590	TUB2	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.04	OrthoFinder output from all 47 species
Gb_33450	TUB6	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.04	OrthoFinder output from all 47 species
LOC_Os01g59150.1	TUB6, LOC_Os01g59150	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.03	OrthoFinder output from all 47 species
LOC_Os02g07060.1	TUB8, LOC_Os02g07060	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.02	OrthoFinder output from all 47 species
LOC_Os05g34170.2	TUB6, LOC_Os05g34170	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.02	OrthoFinder output from all 47 species
MA_230579g0020	TUB6	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.04	OrthoFinder output from all 47 species
MA_251404g0010	TUB2	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.03	OrthoFinder output from all 47 species
MA_55439g0010	TUB2	Tubulin beta-1 chain OS=Solanum tuberosum...	0.03	OrthoFinder output from all 47 species
MA_7436374g0010	TUB6	Tubulin beta-6 chain OS=Zea mays (sp\|q41783\|tbb6_maize : 276.0)	0.03	OrthoFinder output from all 47 species
MA_79708g0010	TUB6	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.02	OrthoFinder output from all 47 species
Mp1g20730.1	TUB6	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.03	OrthoFinder output from all 47 species
Msp_g29673	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Msp_g45769	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Nbi_g06967	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Nbi_g18799	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.05	OrthoFinder output from all 47 species
Ore_g04175	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Ore_g07309	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Pir_g03054	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.05	OrthoFinder output from all 47 species
Ppi_g05536	TUB8	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Sam_g16934	No alias	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Smo164404	TUB6	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.06	OrthoFinder output from all 47 species
Smo170592	TUB6	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Solyc03g025730.3.1	TUB8, Solyc03g025730	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.04	OrthoFinder output from all 47 species
Solyc10g080940.3.1	TUB6, Solyc10g080940	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.05	OrthoFinder output from all 47 species
Solyc10g086760.2.1	TUB8, Solyc10g086760	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.03	OrthoFinder output from all 47 species
Spa_g40586	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.05	OrthoFinder output from all 47 species
Tin_g09112	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Zm00001e039740_P001	TUB9, Zm00001e039740	Tubulin beta-7 chain OS=Oryza sativa subsp. japonica...	0.01	OrthoFinder output from all 47 species
Zm00001e042329_P001	TUB9, Zm00001e042329	Tubulin beta-7 chain OS=Oryza sativa subsp. japonica...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	266	387
IPR003008	Tubulin_FtsZ_GTPase	3	216

External Links

No external refs found!

Aspi01Gene08571.t1 (TUB6, Aspi01Gene08571)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation