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  5. Aspi01Gene09286.t1

Aspi01Gene09286.t1 (Aspi01Gene09286)


Aliases : Aspi01Gene09286

Description : not classified & original description: none


Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene09286.t1

Target Alias Description ECC score Gene Family Method Actions
AT5G01830 No alias ARM repeat superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g082530 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07408 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g00725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13651 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05458 PUB14, ATPUB14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_08792 ATPUB17, PUB17 U-box domain-containing protein 1 OS=Medicago truncatula... 0.04 OrthoFinder output from all 47 species
Gb_21414 PUB13, ATPUB13 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Lfl_g13185 PUB13, ATPUB13 E3 ubiquitin ligase *(PUB15) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431607g0010 ATPUB17, PUB17 U-box domain-containing protein 1 OS=Medicago truncatula... 0.03 OrthoFinder output from all 47 species
MA_196504g0010 No alias U-box domain-containing protein 1 OS=Medicago truncatula... 0.02 OrthoFinder output from all 47 species
MA_69133g0010 PUB14, ATPUB14 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Msp_g15616 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35257 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g24118 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11295 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17953 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g25353 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g33345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01237 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g114160.1.1 Solyc03g114160 E3 ubiquitin ligase (PUB) 0.04 OrthoFinder output from all 47 species
Solyc05g008230.3.1 Solyc05g008230 E3 ubiquitin ligase (PUB) 0.04 OrthoFinder output from all 47 species
Zm00001e014377_P001 ATPUB17, PUB17,... U-box domain-containing protein 4 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000225 Armadillo 132 170
No external refs found!