Aspi01Gene09935.t1 (CRR21, Aspi01Gene09935)


Aliases : CRR21, Aspi01Gene09935

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene09935.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00156450 REME1,... Pentatricopeptide repeat-containing protein At2g03880,... 0.02 OrthoFinder output from all 47 species
Adi_g003282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g043352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g098053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46792 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g16785 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g25481 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61444 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g06729 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37587 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g30728 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0001.g000793 No alias not classified & original description: CDS=1-2415 0.01 OrthoFinder output from all 47 species
Azfi_s0039.g026450 No alias not classified & original description: CDS=1-3138 0.03 OrthoFinder output from all 47 species
Azfi_s0069.g036581 No alias not classified & original description: CDS=1-1653 0.01 OrthoFinder output from all 47 species
Azfi_s0081.g038640 OTP86 not classified & original description: CDS=63-2522 0.01 OrthoFinder output from all 47 species
Azfi_s0124.g048518 No alias not classified & original description: CDS=103-1761 0.03 OrthoFinder output from all 47 species
Azfi_s0236.g059498 No alias not classified & original description: CDS=1-2331 0.02 OrthoFinder output from all 47 species
Cba_g04037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06233 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g20659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34546 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g74881 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.10G007000.1 Ceric.10G007000 not classified & original description: pacid=50613077... 0.03 OrthoFinder output from all 47 species
Ceric.33G026100.1 Ceric.33G026100 not classified & original description: pacid=50606682... 0.02 OrthoFinder output from all 47 species
Ceric.34G009900.1 Ceric.34G009900 not classified & original description: pacid=50623876... 0.03 OrthoFinder output from all 47 species
Dcu_g05694 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10089 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g19078 EMB2261 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g21324 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g29816 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g38628 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g41962 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g46395 EMB2758 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g22601 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28641 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01022208001 No alias Pentatricopeptide repeat-containing protein At4g19191,... 0.02 OrthoFinder output from all 47 species
LOC_Os03g38580.1 EMB2261, LOC_Os03g38580 Pentatricopeptide repeat-containing protein At3g24000,... 0.01 OrthoFinder output from all 47 species
Len_g35002 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g36226 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g17026 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g30346 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g23510 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g57989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04226 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22095 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59836 EMB2758 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007447 No alias not classified & original description: CDS=108-3026 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008668 No alias not classified & original description: CDS=1-2001 0.03 OrthoFinder output from all 47 species
Sam_g02113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g33092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35515 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g079260.2.1 Solyc02g079260 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Solyc04g016540.2.1 Solyc04g016540 Pentatricopeptide repeat-containing protein At2g39620... 0.01 OrthoFinder output from all 47 species
Spa_g00965 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g04485 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18446 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04965 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015440_P001 CRR22, Zm00001e015440 Pentatricopeptide repeat-containing protein At3g57430,... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 300 326
IPR002885 Pentatricopeptide_repeat 25 53
IPR002885 Pentatricopeptide_repeat 227 257
IPR002885 Pentatricopeptide_repeat 199 224
IPR002885 Pentatricopeptide_repeat 122 170
No external refs found!