Aspi01Gene11318.t2 (Aspi01Gene11318)


Aliases : Aspi01Gene11318

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene11318.t2
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Adi_g055707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g00868 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04417 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g07129 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07426 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26645 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30425 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30533 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30769 MEF21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene70575.t1 Aspi01Gene70575 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0014.g013569 No alias not classified & original description: CDS=1-2385 0.04 OrthoFinder output from all 47 species
Azfi_s0093.g043298 OSB3 ssDNA-binding protein *(OSB) & original description: CDS=1-1062 0.03 OrthoFinder output from all 47 species
Ceric.15G050700.1 Ceric.15G050700 not classified & original description: pacid=50639527... 0.04 OrthoFinder output from all 47 species
Ceric.22G020200.1 Ceric.22G020200 not classified & original description: pacid=50615278... 0.03 OrthoFinder output from all 47 species
Ceric.25G070400.1 Ceric.25G070400 not classified & original description: pacid=50594567... 0.03 OrthoFinder output from all 47 species
Cre12.g483700 OSB4 Cell cycle.organelle machineries.DNA... 0.03 OrthoFinder output from all 47 species
Dcu_g19145 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05108 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_14728 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
LOC_Os08g37520.1 LOC_Os08g37520 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Lfl_g03398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03987 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07374 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12137 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17485 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g34604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_480955g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Msp_g03152 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10444 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13553 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g43620 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g23561 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53705 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo105614 CRR2 Pentatricopeptide repeat-containing protein At3g02330,... 0.03 OrthoFinder output from all 47 species
Smo99756 No alias Pentatricopeptide repeat-containing protein At2g39620... 0.02 OrthoFinder output from all 47 species
Spa_g25363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e041048_P001 OTP86, Zm00001e041048 RNA editing factor (OTP86) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 539 564
IPR002885 Pentatricopeptide_repeat 170 193
IPR002885 Pentatricopeptide_repeat 565 612
IPR002885 Pentatricopeptide_repeat 262 310
IPR002885 Pentatricopeptide_repeat 363 410
IPR002885 Pentatricopeptide_repeat 463 510
No external refs found!