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  5. Aspi01Gene13580.t1

Aspi01Gene13580.t1 (ATSYP52, SYP52,...)


Aliases : ATSYP52, SYP52, Aspi01Gene13580

Description : Qc-type SYP5-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0001545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001545_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene13580.t1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT1G16230 No alias Target SNARE coiled-coil domain protein 0.04 OrthoFinder output from all 47 species
Adi_g052524 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Azfi_s0327.g065240 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001604.2 No alias Vesicle trafficking.SNARE target membrane recognition... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010389 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!