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  5. Aspi01Gene14342.t1

Aspi01Gene14342.t1 (EXPA2, ATHEXP ALPHA...)


Aliases : EXPA2, ATHEXP ALPHA 1.12, ATEXP2, ATEXPA2, EXP2, Aspi01Gene14342

Description : alpha-class expansin & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene14342.t1

Target Alias Description ECC score Gene Family Method Actions
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.03 OrthoFinder output from all 47 species
Adi_g025808 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26309 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01552 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Als_g51474 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17770 ATEXPA10,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g40542 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05834 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.29G046400.1 EXPA16, ATHEXP... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g16853 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008762001 ATEXPA11, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 OrthoFinder output from all 47 species
GSVIVT01023919001 ATEXPL2, EXPL2,... Cell wall.cell wall proteins.expansins.alpha-like-type expansin 0.02 OrthoFinder output from all 47 species
GSVIVT01035233001 ATEXP13,... Expansin-A13 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_01048 EXP15, ATEXPA15,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
LOC_Os03g44290.1 ATHEXP BETA 1.1,... Expansin-B12 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os05g19570.1 LOC_Os05g19570 alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os06g41700.1 ATEXPA20,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os10g40710.1 ATHEXP BETA 1.4,... Expansin-B2 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Len_g16681 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
MA_10020g0010 ATEXPA10,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
MA_172610g0010 EXPA8, ATHEXP... alpha-class expansin 0.01 OrthoFinder output from all 47 species
MA_2687768g0010 EXPA8, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
MA_36587g0010 EXPA8, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Msp_g01863 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20020 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20452 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40782 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30591 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g39288 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29879 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g081210.3.1 ATEXP13,... alpha-class expansin 0.01 OrthoFinder output from all 47 species
Spa_g09301 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15584 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g15585 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g25562 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48547 ATEXPA10,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g30401 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e003889_P001 ATEXPA3, EXP3,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e037877_P001 ATHEXP BETA 1.4,... Expansin-B4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e037879_P001 ATHEXP BETA 1.4,... Expansin-B3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e038931_P002 ATEXPL2, EXPL2,... alpha-like-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e040578_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 449 526
IPR009009 RlpA-like_DPBB 351 438
IPR041577 RT_RNaseH_2 67 165
No external refs found!