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  5. Aspi01Gene16342.t1

Aspi01Gene16342.t1 (Aspi01Gene16342)


Aliases : Aspi01Gene16342

Description : LIM-type transcription factor & original description: none


Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene16342.t1

Target Alias Description ECC score Gene Family Method Actions
AT2G45800 No alias GATA type zinc finger transcription factor family protein 0.04 OrthoFinder output from all 47 species
Aspi01Gene53056.t1 Aspi01Gene53056 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39812 No alias LIM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g03324 No alias LIM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05819 No alias LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428887g0010 No alias transcription factor (LIM) 0.03 OrthoFinder output from all 47 species
Nbi_g08756 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo229974 No alias RNA biosynthesis.transcriptional activation.LIM... 0.03 OrthoFinder output from all 47 species
Solyc08g007940.4.1 Solyc08g007940 transcription factor (LIM) 0.03 OrthoFinder output from all 47 species
Tin_g12254 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018310_P001 WLIM1, Zm00001e018310 transcription factor (LIM) 0.04 OrthoFinder output from all 47 species
Zm00001e023098_P001 Zm00001e023098 transcription factor (LIM) 0.02 OrthoFinder output from all 47 species
Zm00001e029431_P002 WLIM1, Zm00001e029431 transcription factor (LIM) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001781 Znf_LIM 10 64
IPR001781 Znf_LIM 102 157
No external refs found!