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  5. Aspi01Gene16706.t1

Aspi01Gene16706.t1 (Aspi01Gene16706)


Aliases : Aspi01Gene16706

Description : CMF transcription factor & original description: none


Gene families : OG0001051 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene16706.t1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AT1G49130 No alias B-box type zinc finger protein with CCT domain 0.07 OrthoFinder output from all 47 species
AT1G68520 No alias B-box type zinc finger protein with CCT domain 0.02 OrthoFinder output from all 47 species
Azfi_s0055.g034007 No alias CMF transcription factor & original description: CDS=693-2417 0.04 OrthoFinder output from all 47 species
Azfi_s0172.g055744 No alias not classified & original description: CDS=1-1599 0.05 OrthoFinder output from all 47 species
Ceric.08G070500.1 Ceric.08G070500 BBX class-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.16G076600.1 Ceric.16G076600 not classified & original description: pacid=50589566... 0.06 OrthoFinder output from all 47 species
GSVIVT01024661001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
MA_96860g0010 CIA2 transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species
Nbi_g24194 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09212 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43291 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18432 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo141010 COL3, ATCOL3 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Solyc03g119540.3.1 Solyc03g119540 transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000315 Znf_B-box 23 65
IPR010402 CCT_domain 477 519
No external refs found!