Aliases : CRR22, Aspi01Gene17121
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aspi01Gene17121.t1 | |
| Cluster | HCCA: Cluster_9 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g036784 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g083164 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g22000 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g49175 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g12943 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g18923 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30880 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g31959 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g16640 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g24623 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g30728 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene02505.t1 | Aspi01Gene02505 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene12659.t1 | Aspi01Gene12659 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene14860.t1 | Aspi01Gene14860 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene26329.t1 | Aspi01Gene26329 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene28051.t2 | OSB3, Aspi01Gene28051 | cofactor of plastid-encoded RNA polymerase *(TAC9) &... | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene28610.t1 | REME1, Aspi01Gene28610 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene34702.t1 | Aspi01Gene34702 | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene41281.t1 | OTP84, Aspi01Gene41281 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene49892.t1 | Aspi01Gene49892 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene52571.t1 | Aspi01Gene52571 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene54043.t1 | Aspi01Gene54043 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene70575.t1 | Aspi01Gene70575 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g06531 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g06556 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07022 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07024 | OTP86 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07786 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g10692 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g11909 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g20671 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g33742 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34546 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g35117 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g44516 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g68955 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g75371 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g77187 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.23G075300.1 | Ceric.23G075300 | not classified & original description: pacid=50609898... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.28G069900.1 | Ceric.28G069900 | not classified & original description: pacid=50570610... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08785 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g12787 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g36056 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g37654 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g03987 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g05661 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22123 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g26387 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g49994 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01033389001 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g15530.1 | LOC_Os01g15530 | Pentatricopeptide repeat-containing protein At5g56310... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g03785 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g04783 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g09274 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g15309 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17578 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17761 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18520 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g19025 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g21178 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g26310 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g26486 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g29833 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g44822 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g54495 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g54668 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g54934 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g56629 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07842 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g17699 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g17740 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g22928 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g43591 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g32352 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g33905 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g13338 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g52500 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63504 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63764 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g04674 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06319 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06451 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g18927 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g29583 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g43260 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g48450 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g52857 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g61597 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0021.g008505 | CRR22 | not classified & original description: CDS=1-1692 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0026.g009533 | CRR22 | not classified & original description: CDS=248-2017 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0174.g024503 | No alias | not classified & original description: CDS=1-2574 | 0.03 | OrthoFinder output from all 47 species | |
| Smo81196 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g33790 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g17413 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g23004 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g26720 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g30402 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g44131 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 140 | 187 |
| IPR002885 | Pentatricopeptide_repeat | 407 | 455 |
| IPR002885 | Pentatricopeptide_repeat | 241 | 288 |
| IPR002885 | Pentatricopeptide_repeat | 39 | 86 |
| IPR002885 | Pentatricopeptide_repeat | 482 | 506 |
| IPR002885 | Pentatricopeptide_repeat | 215 | 240 |
| IPR002885 | Pentatricopeptide_repeat | 316 | 341 |
| No external refs found! |
