Aliases : Aspi01Gene18687
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aspi01Gene18687.t1 | |
| Cluster | HCCA: Cluster_148 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00030p00109240 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g22000 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g16835 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05010 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06074 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18621 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19114 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30425 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g39950 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g09079 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g15360 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g28662 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g30728 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene26858.t1 | Aspi01Gene26858 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0028.g024007 | No alias | not classified & original description: CDS=1-1332 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g03311 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07721 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g33742 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34546 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g45906 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g28478 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g42997 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g45717 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g10909 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g36064 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g23679 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g24073 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g40646 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008656001 | No alias | Pentatricopeptide repeat-containing protein At5g50990... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g41040.1 | LOC_Os06g41040 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g04783 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g07381 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07823 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g36882 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g43136 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g05809 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g18691 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g22406 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g23584 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g07011 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g31411 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g33298 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g63223 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002236 | No alias | not classified & original description: CDS=1-2649 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0062.g015571 | No alias | not classified & original description: CDS=1-1581 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0132.g022201 | No alias | not classified & original description: CDS=265-2808 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g07135 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g24781 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g28894 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo105614 | CRR2 | Pentatricopeptide repeat-containing protein At3g02330,... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g110010.3.1 | Solyc01g110010 | Pentatricopeptide repeat-containing protein At1g74600,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g090440.1.1 | LPA66, Solyc09g090440 | Pentatricopeptide repeat-containing protein At5g66520... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g042400.1.1 | SLO1, Solyc12g042400 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e021453_P001 | CRR28, Zm00001e021453 | Pentatricopeptide repeat-containing protein At5g06540... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 246 | 270 |
| IPR002885 | Pentatricopeptide_repeat | 347 | 372 |
| IPR002885 | Pentatricopeptide_repeat | 145 | 170 |
| IPR002885 | Pentatricopeptide_repeat | 373 | 420 |
| IPR002885 | Pentatricopeptide_repeat | 473 | 521 |
| IPR002885 | Pentatricopeptide_repeat | 172 | 217 |
| IPR002885 | Pentatricopeptide_repeat | 272 | 319 |
| IPR002885 | Pentatricopeptide_repeat | 70 | 117 |
| IPR002885 | Pentatricopeptide_repeat | 777 | 823 |
| IPR002885 | Pentatricopeptide_repeat | 574 | 622 |
| IPR002885 | Pentatricopeptide_repeat | 676 | 719 |
| No external refs found! |
