Aliases : CRR2, Aspi01Gene20498
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aspi01Gene20498.t1 | |
| Cluster | HCCA: Cluster_143 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00138570 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00010p00113430 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g18485... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00010p00260120 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g74600,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00071p00124250 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g13880... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00095p00039180 | OTP86,... | Pentatricopeptide repeat-containing protein At3g63370,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00099p00097640 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g39530... | 0.02 | OrthoFinder output from all 47 species | |
| AT5G59600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g035616 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g088800 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g099122 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g49175 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g05108 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g05216 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g07887 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g13276 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g16414 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g17191 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g17517 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g30691 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g36105 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g37733 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g38788 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g39105 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05671 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g18268 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g14055 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g16102 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g16640 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g24623 | EMB2758 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g25552 | OTP86 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g30728 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene01199.t1 | OTP86, Aspi01Gene01199 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene02463.t1 | Aspi01Gene02463 | ssDNA-binding protein *(OSB) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene37377.t1 | Aspi01Gene37377 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0008.g011478 | No alias | not classified & original description: CDS=1-2919 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0008.g011649 | No alias | not classified & original description: CDS=1-3195 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0033.g025053 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2580 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0065.g035815 | No alias | not classified & original description: CDS=1-2163 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0069.g036583 | No alias | not classified & original description: CDS=1-1518 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0128.g048776 | No alias | not classified & original description: CDS=1-1662 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0277.g061496 | No alias | not classified & original description: CDS=1-2121 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0301.g063681 | REME1 | not classified & original description: CDS=1-1416 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0345.g065835 | No alias | not classified & original description: CDS=1-1926 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0551.g076599 | No alias | not classified & original description: CDS=1-1686 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0808.g087728 | CRR22 | not classified & original description: CDS=1-2094 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0889.g091250 | No alias | not classified & original description: CDS=1-2652 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s1334.g101644 | No alias | not classified & original description: CDS=1-3543 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s4317.g118724 | No alias | not classified & original description: CDS=1-465 | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g11909 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g34546 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g68955 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.01G121800.1 | Ceric.01G121800 | not classified & original description: pacid=50593016... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.09G069300.1 | OTP86, Ceric.09G069300 | not classified & original description: pacid=50588354... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.14G008900.1 | Ceric.14G008900 | not classified & original description: pacid=50634493... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.29G070800.1 | Ceric.29G070800 | not classified & original description: pacid=50625555... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.36G001100.1 | Ceric.36G001100 | not classified & original description: pacid=50568746... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g05005 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g30474 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g12787 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g37654 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g43258 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g11730 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g26357 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g07460 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g17074 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g29034 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01015461001 | ABCG40, PDR12,... | Solute transport.primary active transport.ABC... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g51790.1 | LOC_Os01g51790 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g31000.1 | LOC_Os07g31000 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g30620.1 | LOC_Os12g30620 | Pentatricopeptide repeat-containing protein At3g29230... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g16432 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18308 | OTP84 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18947 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g23907 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g26588 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g34161 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g56481 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07396 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g38464 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g17699 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g17740 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g32056 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g40811 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g44335 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g15698 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g26265 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g30106 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g30346 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g38399 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g38653 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g41058 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g41721 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g01899 | OSB3 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g07306 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g09990 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g12341 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g12671 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g18756 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g35928 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g02540 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57988 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63120 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g23470 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g05345 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g08859 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g18927 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g32530 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g48450 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g57859 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0024.g009138 | No alias | component *(NRPC16/RPC34) of TFIIIe transcription factor... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0029.g010179 | No alias | not classified & original description: CDS=88-2685 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0055.g014482 | No alias | not classified & original description: CDS=1-1119 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0059.g015038 | CRR22 | not classified & original description: CDS=1-1620 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0080.g017968 | No alias | not classified & original description: CDS=1-2673 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0223.g026268 | No alias | not classified & original description: CDS=1-2328 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s1579.g028098 | No alias | not classified & original description: CDS=1-249 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g03885 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13972 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g26655 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo111982 | No alias | Pentatricopeptide repeat-containing protein At5g66520... | 0.02 | OrthoFinder output from all 47 species | |
| Smo78092 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| Smo91775 | No alias | Pentatricopeptide repeat-containing protein At4g25270,... | 0.01 | OrthoFinder output from all 47 species | |
| Smo92008 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.04 | OrthoFinder output from all 47 species | |
| Smo92610 | No alias | Pentatricopeptide repeat-containing protein At5g56310... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g096680.1.1 | REME1, Solyc12g096680 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g08793 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g14314 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g50449 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g06419 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g07561 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g08462 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g21929 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 397 | 418 |
| IPR002885 | Pentatricopeptide_repeat | 182 | 206 |
| IPR002885 | Pentatricopeptide_repeat | 497 | 521 |
| IPR002885 | Pentatricopeptide_repeat | 423 | 470 |
| IPR002885 | Pentatricopeptide_repeat | 208 | 255 |
| IPR002885 | Pentatricopeptide_repeat | 322 | 369 |
| IPR046848 | E_motif | 540 | 589 |
| No external refs found! |
