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  5. Aspi01Gene20867.t1

Aspi01Gene20867.t1 (TIR5, MSG1, NPH4,...)


Aliases : TIR5, MSG1, NPH4, IAA23, IAA25, IAA21, BIP, ARF7, Aspi01Gene20867

Description : not classified & original description: none


Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene20867.t1
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AT5G60450 ARF4 auxin response factor 4 0.03 OrthoFinder output from all 47 species
Adi_g014256 ARF16 ARF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g024483 ARF19, IAA22, ARF11 ARF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g075709 ARF6 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089250 ARF6 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53089.t1 HSS, ARF1-BP,... ARF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0065.g035934 No alias not classified & original description: CDS=1-342 0.01 OrthoFinder output from all 47 species
Azfi_s0099.g044147 ARF16 ARF-type transcription factor & original description: CDS=1-2757 0.03 OrthoFinder output from all 47 species
Ceric.18G034300.1 ARF16, Ceric.18G034300 ARF-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g27461 ARF6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g07818 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g12750.1 ARF6 transcription factor (ARF) 0.02 OrthoFinder output from all 47 species
Ore_g31517 ARF1 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08938 ARF16 ARF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010740 TIR5, MSG1,... ARF-type transcription factor & original description: CDS=1-2400 0.03 OrthoFinder output from all 47 species
Tin_g27871 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e041248_P001 ARF10, Zm00001e041248 transcription factor (ARF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 68 152
No external refs found!