Aspi01Gene22090.t1 (Aspi01Gene22090)


Aliases : Aspi01Gene22090

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene22090.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00219990 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
AMTR_s00587p00011650 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AT5G04780 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g004506 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022088 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060245 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g066083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074694 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075317 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g099272 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117068 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04109 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27794 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03230 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23879 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30162 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30788 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g46291 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54765 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g63751 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13877 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37979 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000731 No alias not classified & original description: CDS=1-3192 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007938 No alias not classified & original description: CDS=1-4179 0.03 OrthoFinder output from all 47 species
Azfi_s0009.g011983 No alias not classified & original description: CDS=1-2745 0.03 OrthoFinder output from all 47 species
Azfi_s0009.g012008 EMB2758 not classified & original description: CDS=1-2031 0.04 OrthoFinder output from all 47 species
Azfi_s0015.g013865 No alias not classified & original description: CDS=1-1626 0.04 OrthoFinder output from all 47 species
Azfi_s0028.g023827 No alias not classified & original description: CDS=1-3255 0.05 OrthoFinder output from all 47 species
Azfi_s0039.g026394 OTP86 not classified & original description: CDS=1-2238 0.04 OrthoFinder output from all 47 species
Azfi_s0069.g036568 No alias not classified & original description: CDS=1-2256 0.03 OrthoFinder output from all 47 species
Azfi_s0154.g053510 No alias not classified & original description: CDS=1-2550 0.04 OrthoFinder output from all 47 species
Azfi_s0162.g054179 No alias not classified & original description: CDS=1-2562 0.04 OrthoFinder output from all 47 species
Azfi_s0425.g069243 No alias not classified & original description: CDS=144-3230 0.04 OrthoFinder output from all 47 species
Azfi_s0652.g081079 No alias not classified & original description: CDS=1-2169 0.02 OrthoFinder output from all 47 species
Cba_g05305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07421 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g21792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G039400.1 Ceric.03G039400 not classified & original description: pacid=50571919... 0.02 OrthoFinder output from all 47 species
Ceric.23G083100.1 Ceric.23G083100 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.28G027200.1 DOT4, Ceric.28G027200 not classified & original description: pacid=50570918... 0.02 OrthoFinder output from all 47 species
Ceric.29G060200.1 Ceric.29G060200 not classified & original description: pacid=50624987... 0.02 OrthoFinder output from all 47 species
Ceric.34G063100.1 Ceric.34G063100 not classified & original description: pacid=50623551... 0.02 OrthoFinder output from all 47 species
Ceric.38G052600.1 Ceric.38G052600 not classified & original description: pacid=50580600... 0.03 OrthoFinder output from all 47 species
Dcu_g18875 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21328 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02951 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09208 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18127 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20585 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20812 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25136 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012201001 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
GSVIVT01035491001 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
Len_g18872 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g55705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14901 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g19376 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28498 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g43428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04969 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06656 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08794 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29848 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63640 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65182 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23584 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07521 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32073 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g40056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55034 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g56081 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002209 No alias not classified & original description: CDS=347-2416 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007526 No alias not classified & original description: CDS=1-1728 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013552 No alias not classified & original description: CDS=1-2598 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0078.g017683 No alias not classified & original description: CDS=1-2736 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0134.g022300 CRR22 not classified & original description: CDS=1-1791 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0170.g024361 OTP84 cyclin-dependent kinase inhibitor *(KRP/ICK) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0185.g024997 No alias not classified & original description: CDS=356-3322 0.03 OrthoFinder output from all 47 species
Sam_g12533 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc01g081020.1.1 Solyc01g081020 RNA editing factor (OTP80) 0.03 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Spa_g12101 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05931 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26884 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31905 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000301_P001 Zm00001e000301 Pentatricopeptide repeat-containing protein At4g35130,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR046848 E_motif 406 452
IPR002885 Pentatricopeptide_repeat 289 335
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 123 161
IPR002885 Pentatricopeptide_repeat 188 236
IPR002885 Pentatricopeptide_repeat 263 285
IPR002885 Pentatricopeptide_repeat 363 387
No external refs found!