Aspi01Gene23322.t1 (Aspi01Gene23322)

Aliases : Aspi01Gene23322

Description : not classified & original description: none

Gene families : OG0001752 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001752_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene23322.t1
Cluster	HCCA: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
Ala_g25518	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Aop_g04798	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g06218	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.08G036300.1	Ceric.08G036300	not classified & original description: pacid=50638099...	0.04	OrthoFinder output from all 47 species
Ceric.12G006100.1	Ceric.12G006100	not classified & original description: pacid=50602399...	0.03	OrthoFinder output from all 47 species
Dde_g16569	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01014830001	No alias	Uncharacterized protein At4g26485 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Gb_41122	PIP1C, TMP-B, PIP1;3	Probable aquaporin PIP1-4 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Lfl_g27045	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g28551	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g07353	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g19092	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g02921	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g49092	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g25813	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000154	rRNA modification	None	Extended
BP	GO:0001510	RNA methylation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006364	rRNA processing	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008170	N-methyltransferase activity	None	Extended
MF	GO:0008173	RNA methyltransferase activity	None	Extended
MF	GO:0008649	rRNA methyltransferase activity	None	Extended
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	None	Extended
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
MF	GO:0016436	rRNA (uridine) methyltransferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0031167	rRNA methylation	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0070042	rRNA (uridine-N3-)-methyltransferase activity	IEA	Interproscan
BP	GO:0070475	rRNA base methylation	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140102	catalytic activity, acting on a rRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR019446	BMT5-like	42	208

External Links

No external refs found!

Aspi01Gene23322.t1 (Aspi01Gene23322)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation