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  5. Aspi01Gene26820.t1

Aspi01Gene26820.t1 (TIFY10A, JAZ1, Aspi01Gene26820)


Aliases : TIFY10A, JAZ1, Aspi01Gene26820

Description : TIFY-type transcription factor & original description: none


Gene families : OG0000154 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000154_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene26820.t1
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Adi_g040396 JAZ4, TIFY6A TIFY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g051075 JAZ4, TIFY6A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27866 JAZ4, TIFY6A TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32023 JAZ9, TIFY7 TIFY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26282 JAZ9, TIFY7 TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10901.t1 JAI3, JAZ3,... TIFY-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene10902.t1 JAI3, JAZ3,... TIFY-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Ceric.36G022500.1 JAZ4, TIFY6A,... TIFY-type transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
LOC_Os03g28940.1 TIFY10B, JAZ2,... component JAZ of jasmonic acid receptor complex.... 0.03 OrthoFinder output from all 47 species
LOC_Os07g42370.1 TIFY10A, JAZ1,... component JAZ of jasmonic acid receptor complex.... 0.02 OrthoFinder output from all 47 species
Ppi_g44312 JAZ4, TIFY6A TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29625 JAZ4, TIFY6A TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01553 PPD2, TIFY4B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR018467 CCT_CS 880 899
IPR010399 Tify_dom 794 822
IPR005162 Retrotrans_gag_dom 617 710
No external refs found!