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  5. Aspi01Gene27980.t2

Aspi01Gene27980.t2 (Aspi01Gene27980)


Aliases : Aspi01Gene27980

Description : not classified & original description: none


Gene families : OG0002397 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002397_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene27980.t2
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00239070 PMZ, SAP12,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
AT3G28210 PMZ, SAP12 zinc finger (AN1-like) family protein 0.02 OrthoFinder output from all 47 species
Als_g29975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00217 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01033300001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
Gb_16838 No alias C2H2 zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
LOC_Os09g21710.1 PMZ, SAP12,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
MA_158847g0010 PMZ, SAP12 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Msp_g10026 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g087210.3.1 PMZ, SAP12,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000058 Znf_AN1 63 103
No external refs found!