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  5. Aspi01Gene29036.t1

Aspi01Gene29036.t1 (AGO4, OCP11, Aspi01Gene29036)


Aliases : AGO4, OCP11, Aspi01Gene29036

Description : siRNA-integrating factor *(AGO) & original description: none


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene29036.t1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Adi_g049547 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113326 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Ala_g14664 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Als_g40616 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10666 AGO1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene35126.t1 AGO1, Aspi01Gene35126 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.06 OrthoFinder output from all 47 species
Aspi01Gene59574.t2 AGO1, Aspi01Gene59574 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.04 OrthoFinder output from all 47 species
Aspi01Gene62001.t1 AGO3, Aspi01Gene62001 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_21789 AGO7, ZIP siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.03 OrthoFinder output from all 47 species
LOC_Os03g33650.1 AGO7, ZIP, LOC_Os03g33650 Protein argonaute 7 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Ore_g05462 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Ore_g20845 PNH, AGO10, ZLL not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002271 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description:... 0.03 OrthoFinder output from all 47 species
Spa_g27914 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30174 AGO1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e029696_P001 AGO1, Zm00001e029696 RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003100 PAZ_dom 272 388
IPR014811 ArgoL1 207 253
IPR003165 Piwi 544 856
IPR032474 Argonaute_N 37 195
No external refs found!