Aspi01Gene29463.t1 (REME1, Aspi01Gene29463)


Aliases : REME1, Aspi01Gene29463

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene29463.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00145640 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
AMTR_s00065p00033910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g49740... 0.02 OrthoFinder output from all 47 species
AT1G53600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G56570 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G68930 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 OrthoFinder output from all 47 species
AT1G77010 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G01510 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G02330 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G03580 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G24000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G26782 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g002045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034273 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g098886 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g100823 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20781 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31151 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30562 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54594 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24083 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27600 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g34282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37332 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009022 No alias not classified & original description: CDS=1-2334 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010932 REME1 not classified & original description: CDS=1-1479 0.04 OrthoFinder output from all 47 species
Azfi_s0020.g015553 OTP84 not classified & original description: CDS=36-2027 0.03 OrthoFinder output from all 47 species
Azfi_s0127.g048709 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2400 0.02 OrthoFinder output from all 47 species
Azfi_s0184.g056534 OTP84 not classified & original description: CDS=1-2040 0.03 OrthoFinder output from all 47 species
Azfi_s0229.g059121 CRR22 not classified & original description: CDS=1-2070 0.03 OrthoFinder output from all 47 species
Azfi_s0235.g059459 OTP86 not classified & original description: CDS=1-2445 0.04 OrthoFinder output from all 47 species
Azfi_s0503.g073910 No alias not classified & original description: CDS=59-2179 0.05 OrthoFinder output from all 47 species
Cba_g12686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G103400.1 Ceric.04G103400 not classified & original description: pacid=50630509... 0.04 OrthoFinder output from all 47 species
Ceric.09G085300.1 Ceric.09G085300 not classified & original description: pacid=50587383... 0.04 OrthoFinder output from all 47 species
Ceric.15G026300.1 Ceric.15G026300 not classified & original description: pacid=50640552... 0.03 OrthoFinder output from all 47 species
Ceric.16G016300.1 Ceric.16G016300 not classified & original description: pacid=50589149... 0.03 OrthoFinder output from all 47 species
Ceric.21G080700.1 Ceric.21G080700 not classified & original description: pacid=50603857... 0.04 OrthoFinder output from all 47 species
Ceric.29G017900.1 Ceric.29G017900 not classified & original description: pacid=50624370... 0.03 OrthoFinder output from all 47 species
Ceric.29G083600.1 Ceric.29G083600 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.36G058400.1 Ceric.36G058400 not classified & original description: pacid=50568396... 0.02 OrthoFinder output from all 47 species
Dac_g39198 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g43531 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07665 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g08120.1 OTP81, LOC_Os01g08120 RNA editing factor (OTP81) 0.02 OrthoFinder output from all 47 species
LOC_Os07g46770.1 LOC_Os07g46770 Pentatricopeptide repeat-containing protein At4g21065... 0.02 OrthoFinder output from all 47 species
LOC_Os11g01836.1 LOC_Os11g01836 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os11g37330.2 LOI1, MEF11,... RNA editing factor (MEF11) 0.03 OrthoFinder output from all 47 species
Lfl_g04178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_42343g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Msp_g07729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34233 REME1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g38951 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g41395 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g27565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32622 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04637 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11120 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g36024 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g52632 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004955 No alias not classified & original description: CDS=1-2634 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007241 No alias protein S-acyltransferase *(PAT22) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019387 REME1 not classified & original description: CDS=1-1161 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021224 No alias not classified & original description: CDS=1-2823 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0208.g025848 No alias not classified & original description: CDS=1-2184 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0275.g027065 No alias not classified & original description: CDS=1-2244 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s3367.g028731 No alias not classified & original description: CDS=2473-3459 0.03 OrthoFinder output from all 47 species
Sam_g19797 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo45004 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Solyc06g048900.1.1 Solyc06g048900 Pentatricopeptide repeat-containing protein At2g40720... 0.03 OrthoFinder output from all 47 species
Spa_g06564 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12101 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04677 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g25660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27040 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g45240 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e034903_P001 SLO1, Zm00001e034903 Pentatricopeptide repeat-containing protein At2g22410,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 239 257
IPR002885 Pentatricopeptide_repeat 189 214
IPR046848 E_motif 499 561
IPR002885 Pentatricopeptide_repeat 303 340
No external refs found!