Aspi01Gene31809.t2 (Aspi01Gene31809)

Aliases : Aspi01Gene31809

Description : pectin methylesterase & original description: none

Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene31809.t2
Cluster	HCCA: Cluster_105

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00116p00025230	evm_27.TU.AmTr_v1...	Probable pectinesterase 8 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AT5G47500	No alias	Pectin lyase-like superfamily protein	0.04	OrthoFinder output from all 47 species
Aob_g32641	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g02507	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g07992	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g16751	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g20021	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g21373	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g22415	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g56742	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.10G071300.1	Ceric.10G071300	pectin methylesterase & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.29G054600.1	Ceric.29G054600	pectin methylesterase & original description:...	0.03	OrthoFinder output from all 47 species
Dcu_g06266	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g11351	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g44261	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01014641001	QRT1	Cell wall.pectin.homogalacturonan.modification and...	0.02	OrthoFinder output from all 47 species
GSVIVT01015022001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.02	OrthoFinder output from all 47 species
GSVIVT01031250001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.03	OrthoFinder output from all 47 species
Len_g16179	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
MA_10267810g0010	No alias	pectin methylesterase	0.04	OrthoFinder output from all 47 species
MA_10428610g0010	No alias	pectin methylesterase	0.02	OrthoFinder output from all 47 species
MA_19196g0010	ATPE11, PE11	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Pir_g35988	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g11138	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g31507	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g63851	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g075620.4.1	Solyc02g075620	pectin methylesterase	0.02	OrthoFinder output from all 47 species
Solyc07g043240.4.1	Solyc07g043240	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Tin_g15602	No alias	pecTin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g36991	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e002891_P001	Zm00001e002891	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Zm00001e027944_P002	ATPE11, PE11,...	pectin methylesterase	0.02	OrthoFinder output from all 47 species
Zm00001e029074_P001	Zm00001e029074	pectin methylesterase	0.02	OrthoFinder output from all 47 species
Zm00001e033546_P001	Zm00001e033546	pectin methylesterase	0.02	OrthoFinder output from all 47 species
Zm00001e035522_P001	QRT1, Zm00001e035522	pectin methylesterase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	87	367

External Links

No external refs found!

Aspi01Gene31809.t2 (Aspi01Gene31809)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation