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  5. Aspi01Gene32280.t1

Aspi01Gene32280.t1 (ATDCL2, DCL2, Aspi01Gene32280)


Aliases : ATDCL2, DCL2, Aspi01Gene32280

Description : not classified & original description: none


Gene families : OG0000378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene32280.t1

Target Alias Description ECC score Gene Family Method Actions
Cba_g01358 DCL1, CAF,... endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... 0.04 OrthoFinder output from all 47 species
Cba_g38723 DCL4, ATDCL4 endoribonuclease (DCL2) of transacting siRNA pathway &... 0.04 OrthoFinder output from all 47 species
Dac_g33201 DCL4, ATDCL4 endoribonuclease (DCL4) of transacting siRNA pathway &... 0.04 OrthoFinder output from all 47 species
Lfl_g03508 DCL4, ATDCL4 endoribonuclease (DCL4) of transacting siRNA pathway &... 0.04 OrthoFinder output from all 47 species
Lfl_g06763 DCL1, CAF,... endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... 0.04 OrthoFinder output from all 47 species
Mp7g11720.1 DCL4, ATDCL4 endoribonuclease (DCL3). endoribonuclease (DCL4) 0.02 OrthoFinder output from all 47 species
Mp7g16380.1 DCL1, CAF,... Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Ppi_g45378 DCL1, CAF,... not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 7 152
No external refs found!